RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 UTS2O95399 124 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 NPPAP01160 153 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 EDN3P14138 238 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 ATP6V1C1P21283 382 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 ELAVL4P26378 380 aaKnown RBP12.7□□□□□ -0.38
RNF40-212ENST00000602784 MST1P26927 711 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 EVI2BP34910 448 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 PTGDSP41222 190 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 CLK3P49761 638 aaKnown RBP12.7□□□□□ -0.38
RNF40-212ENST00000602784 MVDP53602 400 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 GAS1P54826 345 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 PPIAP62937 165 aaKnown RBP12.7□□□□□ -0.38
RNF40-212ENST00000602784 BICRALQ6AI39 1079 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 TIGD3Q6B0B8 471 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 TNFAIP8L2Q6P589 184 aaPredicted RBP12.7□□□□□ -0.38
RNF40-212ENST00000602784 FIGNL1Q6PIW4 674 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 DLEU7Q6UYE1 221 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 DNAJC14Q6Y2X3 702 aaPredicted RBP12.7□□□□□ -0.38
RNF40-212ENST00000602784 MTDHQ86UE4 582 aaKnown RBP12.7□□□□□ -0.38
RNF40-212ENST00000602784 OR52N2Q8NGI0 321 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 OR5D16Q8NGK9 328 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 XAGE5Q8WWM1 108 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 OTUB1Q96FW1 271 aaPredicted RBP12.7□□□□□ -0.38
RNF40-212ENST00000602784 ZNF597Q96LX8 424 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 CCT8L2Q96SF2 557 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 OSBPL11Q9BXB4 747 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 TTTY12Q9BZ98 90 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 RAD21L1Q9H4I0 556 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 POLE3Q9NRF9 147 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 QPCTLQ9NXS2 382 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 KLRF1Q9NZS2 232 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 LIPT1Q9Y234 373 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 NINQ8N4C6 2090 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 LRRC3CA6NJW4 275 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 BBIP1A8MTZ0 92 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 ALG1L2C9J202 215 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 CLIC1O00299 241 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 STX11O75558 287 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 FAM107AO95990 144 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 C1QCP02747 245 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 OR12D1P0DN82 309 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 RFX3P48380 749 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 MASP1P48740 699 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 PLGLB1Q02325 96 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 FADDQ13158 208 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 STX5Q13190 355 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 GTDC1Q4AE62 458 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 FNDC7Q5VTL7 733 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 C16orf62Q7Z3J2 963 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 ZAR1Q86SH2 424 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 MSRB3Q8IXL7 192 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 ANKS4BQ8N8V4 417 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 ST6GALNAC3Q8NDV1 305 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 OR4C3Q8NH37 302 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 OIT3Q8WWZ8 545 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 PMM1Q92871 262 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 RAB8BQ92930 207 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 AURKBQ96GD4 344 aaPredicted RBP12.69□□□□□ -0.38
RNF40-212ENST00000602784 TRNT1Q96Q11 434 aaKnown RBP12.69□□□□□ -0.38
RNF40-212ENST00000602784 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 ZDHHC11Q9H8X9 412 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 FBXO34Q9NWN3 711 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 VAPAQ9P0L0 249 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 B4GALT7Q9UBV7 327 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 CORO2BQ9UQ03 480 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 ARL2BPQ9Y2Y0 163 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 WIF1Q9Y5W5 379 aa12.69□□□□□ -0.38
RNF40-212ENST00000602784 NPIPB9F8W1W9 429 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 FBP2O00757 339 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 ADAM10O14672 748 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 TFECO14948 347 aaPredicted RBP12.68□□□□□ -0.38
RNF40-212ENST00000602784 SNPHO15079 494 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 UNC5CO95185 931 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 CBX6O95503 412 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 BMP2P12643 396 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 PLA2G2AP14555 144 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 RFC3P40938 356 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 ATP12AP54707 1039 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 CASP9P55211 416 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 CYLC2Q14093 348 aaPredicted RBP12.68□□□□□ -0.38
RNF40-212ENST00000602784 RGNQ15493 299 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 GRAMD1BQ3KR37 738 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 COX20Q5RI15 118 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
RNF40-212ENST00000602784 CCNJQ5T5M9 372 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 FAM109AQ8N4B1 249 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 TMEM251Q8N6I4 163 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 WDSUB1Q8N9V3 476 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 ZNF527Q8NB42 609 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 OR1J4Q8NGS1 313 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 RP9Q8TA86 221 aaKnown RBP12.68□□□□□ -0.38
RNF40-212ENST00000602784 PNPT1Q8TCS8 783 aaKnown RBP12.68□□□□□ -0.38
RNF40-212ENST00000602784 ROPN1LQ96C74 230 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms