RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 OR10H4Q8NGA5 316 aa17.2■□□□□ 0.34
UPF1-210ENST00000600689 OR4Q3Q8NH05 313 aa17.2■□□□□ 0.34
UPF1-210ENST00000600689 GLYATL1Q969I3 302 aa17.2■□□□□ 0.34
UPF1-210ENST00000600689 SLC25A13Q9UJS0 675 aa17.2■□□□□ 0.34
UPF1-210ENST00000600689 FLVCR2Q9UPI3 526 aa17.2■□□□□ 0.34
UPF1-210ENST00000600689 DNAH14Q0VDD8 3507 aa17.2■□□□□ 0.34
UPF1-210ENST00000600689 SLC5A10A0PJK1 596 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 MAGEB4O15481 346 aaPredicted RBP17.19■□□□□ 0.34
UPF1-210ENST00000600689 CXCL14O95715 111 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 EPPINO95925 133 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 HLA-DQB1P01920 261 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 VIPR1P32241 457 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 MINDY4Q4G0A6 757 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 TRILQ7L0X0 811 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 NKAIN4Q8IVV8 208 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 TBC1D19Q8N5T2 526 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 OR2T35Q8NGX2 323 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 TM4SF18Q96CE8 201 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 CACNG6Q9BXT2 260 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 SIRT3Q9NTG7 399 aaPredicted RBP17.19■□□□□ 0.34
UPF1-210ENST00000600689 OR6C2Q9NZP2 312 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 TNFRSF10DQ9UBN6 386 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 TMEM5Q9Y2B1 443 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 TMPRSS11DO60235 418 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 PROS1P07225 676 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 CHRM4P08173 479 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 KELP23276 732 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 PPP2R1BP30154 601 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 FGF9P31371 208 aaPredicted RBP17.19■□□□□ 0.34
UPF1-210ENST00000600689 CLDN2P57739 230 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 DGCR2P98153 550 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 ZNF33BQ06732 778 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 ANGPT1Q15389 498 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 PLBD1Q6P4A8 553 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 FBXO15Q8NCQ5 510 aaPredicted RBP17.19■□□□□ 0.34
UPF1-210ENST00000600689 OR5AR1Q8NGP9 310 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 ORAI3Q9BRQ5 295 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 OSGEPL1Q9H4B0 414 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 A4GALTQ9NPC4 353 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 P2RX2Q9UBL9 471 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 KIAA1671Q9BY89 1806 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 HIDE1A8MVS5 230 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 GATBO75879 557 aaKnown RBP17.19■□□□□ 0.34
UPF1-210ENST00000600689 ELFN1P0C7U0 828 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 AANATQ16613 207 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 PLA1AQ53H76 456 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 SIAH3Q8IW03 269 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 TOMM5Q8N4H5 51 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 ARIH2OSQ8N7S6 290 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 KREMEN2Q8NCW0 462 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 MORN4Q8NDC4 146 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 OR2A12Q8NGT7 310 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 OR5P2Q8WZ92 322 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 MS4A7Q9GZW8 240 aaPredicted RBP17.19■□□□□ 0.34
UPF1-210ENST00000600689 OR51V1Q9H2C8 321 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 DIABLOQ9NR28 239 aa17.19■□□□□ 0.34
UPF1-210ENST00000600689 E9PI62 339 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 SGK494L7N484 410 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 KPNA3O00505 521 aaPredicted RBP17.18■□□□□ 0.34
UPF1-210ENST00000600689 RGS11O94810 467 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 TCRBP04435 133 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 SRPRAP08240 638 aaKnown RBP17.18■□□□□ 0.34
UPF1-210ENST00000600689 RAB14P61106 215 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 PRAMEF14Q5SWL7 426 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 PRAMEF13Q5VWM6 474 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 ZNF687Q8N1G0 1237 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 CPXM2Q8N436 756 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 FTMTQ8N4E7 242 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 ZNF527Q8NB42 609 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 OR9A1PQ8NGU1 263 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 GPR137Q96N19 417 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 DPAGT1Q9H3H5 408 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 SEMA4GQ9NTN9 838 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 HCFC2Q9Y5Z7 792 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 A0A1W2PRQ8 180 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 ATP6V1G2-DDX39BF2Z307 99 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 CTSAP10619 480 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 M6PRP20645 277 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 NCBP2P52298 156 aaKnown RBP eCLIP17.18■□□□□ 0.34
UPF1-210ENST00000600689 POLR2LP62875 67 aaKnown RBP17.18■□□□□ 0.34
UPF1-210ENST00000600689 GALEQ14376 348 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 VASNQ6EMK4 673 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 CACUL1Q86Y37 369 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 CCDC116Q8IYX3 515 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 TRMT10AQ8TBZ6 339 aaKnown RBP17.18■□□□□ 0.34
UPF1-210ENST00000600689 GIMAP1Q8WWP7 306 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 METTL2AQ96IZ6 378 aaKnown RBP17.18■□□□□ 0.34
UPF1-210ENST00000600689 LTBP2Q14767 1821 aa17.18■□□□□ 0.34
UPF1-210ENST00000600689 SNRPBP14678 240 aaKnown RBP17.17■□□□□ 0.34
UPF1-210ENST00000600689 BTCP35070 178 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 PITPNBP48739 271 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 ERVFC1P60507 584 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 DSG2Q14126 1118 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 ST3GAL2Q16842 350 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 LILRA6Q6PI73 481 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 KIAA0907Q7Z7F0 614 aaPredicted RBP17.17■□□□□ 0.34
UPF1-210ENST00000600689 NRMQ8IXM6 262 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 TMEM99Q8N816 258 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 ZBTB44Q8NCP5 570 aa17.17■□□□□ 0.34
UPF1-210ENST00000600689 OR4D9Q8NGE8 314 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms