RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 R3HCC1LQ7Z5L2 792 aaKnown RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 OR2M3Q8NG83 312 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 OR2W6PQ8NHA6 318 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 GFM2Q969S9 779 aaKnown RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 RPH3AQ9Y2J0 694 aaPredicted RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 FIS1Q9Y3D6 152 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 IGLV3-32A0A0A0MS00 114 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 EEF1E1-BLOC1S5C9J1V9 151 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 EEF1E1O43324 174 aaKnown RBP14.3□□□□□ -0.12
VRK3-221ENST00000600284 NKX2-2O95096 273 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 EPXP11678 715 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 HK1P19367 917 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 LCN1P31025 176 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 GABRA3P34903 492 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 GPC1P35052 558 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 AGFG1P52594 562 aaKnown RBP14.3□□□□□ -0.12
VRK3-221ENST00000600284 RPL38P63173 70 aaKnown RBP14.3□□□□□ -0.12
VRK3-221ENST00000600284 PRR5P85299 388 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 IFFO1Q0D2I5 559 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 FOXF2Q12947 444 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 ARL13AQ5H913 290 aaPredicted RBP14.3□□□□□ -0.12
VRK3-221ENST00000600284 OR2A2Q6IF42 318 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 ZCCHC12Q6PEW1 402 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 CHMP1BQ7LBR1 199 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 DDIASQ8IXT1 998 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 MEIOBQ8N635 442 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 CDRT4Q8N9R6 151 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 NUP43Q8NFH3 380 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 DUSP19Q8WTR2 217 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 TWIST2Q8WVJ9 160 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 INTS12Q96CB8 462 aaKnown RBP14.3□□□□□ -0.12
VRK3-221ENST00000600284 PPP3R2Q96LZ3 170 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 TSSK3Q96PN8 268 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 FAM111AQ96PZ2 611 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 PIGQQ9BRB3 760 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 GPATCH1Q9BRR8 931 aaKnown RBP14.3□□□□□ -0.12
VRK3-221ENST00000600284 CLEC4MQ9H2X3 399 aaPredicted RBP14.3□□□□□ -0.12
VRK3-221ENST00000600284 MED11Q9P086 117 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 SH3BP4Q9P0V3 963 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 SPG11Q96JI7 2443 aa14.3□□□□□ -0.12
VRK3-221ENST00000600284 DOCK7Q96N67 2140 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 MED12Q93074 2177 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 F8P00451 2351 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 ANKHD1Q8IWZ3 2542 aaKnown RBP14.29□□□□□ -0.12
VRK3-221ENST00000600284 TMEM114B3SHH9 223 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 AKAP10O43572 662 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 UTS2O95399 124 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 CHRNGP07510 517 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 NGFRP08138 427 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 BCKDHAP12694 445 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 MAPK1P28482 360 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 RPL3P39023 403 aaKnown RBP14.29□□□□□ -0.12
VRK3-221ENST00000600284 PCYT1AP49585 367 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 DIO3P55073 304 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 VSNL1P62760 191 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 OCRLQ01968 901 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 MLC1Q15049 377 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 GALNTL6Q49A17 601 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 ZNF385BQ569K4 471 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 ANKRD26P1Q6NSI1 321 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 EMBQ6PCB8 327 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 MARCH3Q86UD3 253 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 GRAMD2AQ8IUY3 354 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 TCP10LQ8TDR4 215 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 GPR151Q8TDV0 419 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 CIDECQ96AQ7 238 aaPredicted RBP14.29□□□□□ -0.12
VRK3-221ENST00000600284 RBM24Q9BX46 236 aaKnown RBP14.29□□□□□ -0.12
VRK3-221ENST00000600284 TBL1XR1Q9BZK7 514 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 FLRT3Q9NZU0 649 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 BAIAP2L1Q9UHR4 511 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 KIAA1549Q9HCM3 1950 aa14.29□□□□□ -0.12
VRK3-221ENST00000600284 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 ALG1L2C9J202 215 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 PIP5K1BO14986 540 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 EMC8O43402 210 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 TNFRSF21O75509 655 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 ANGPTL1O95841 491 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 ART1P52961 327 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 IST1P53990 364 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 RAET1LQ5VY80 246 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 WDR93Q6P2C0 686 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 NATD1Q8N6N6 113 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 OR6Y1Q8NGX8 325 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 FAM110BQ8TC76 370 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 PIK3R3Q92569 461 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 C1GALT1C1Q96EU7 318 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 GIMAP5Q96F15 307 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 RMND5BQ96G75 393 aaPredicted RBP14.28□□□□□ -0.12
VRK3-221ENST00000600284 MS4A4EQ96PG1 132 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 FOXC2Q99958 501 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 RTN4RQ9BZR6 473 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 EQTNQ9NQ60 294 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 SLC17A7Q9P2U7 560 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 STOML1Q9UBI4 398 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 ATP6V1HQ9UI12 483 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 ST6GALNAC2Q9UJ37 374 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 PACSIN3Q9UKS6 424 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 ZNF337Q9Y3M9 751 aa14.28□□□□□ -0.12
VRK3-221ENST00000600284 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 GXYLT2A0PJZ3 443 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms