RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 MIEF1Q9NQG6 463 aa12.71□□□□□ -0.37
SHKBP1-218ENST00000598907 MRPS33Q9Y291 106 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-218ENST00000598907 MMACHCQ9Y4U1 282 aa12.71□□□□□ -0.37
SHKBP1-218ENST00000598907 IGKV3D-11A0A0A0MRZ8 115 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 SAGE2PA6NJ88 616 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 CCT8L1PA6NM43 557 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 A8MVJ9 347 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 MYO1GB0I1T2 1018 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 TGFBR3LH3BV60 316 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 FGF17O60258 216 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 GOSR1O95249 250 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 GPR75O95800 540 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 PGRP06401 933 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 GABRA1P14867 456 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 ENDOUP21128 410 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 ALDH9A1P49189 494 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 SSR4P51571 173 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 NR1H2P55055 460 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 BTG2P78543 158 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 KRT72Q14CN4 511 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 FAM174BQ3ZCQ3 159 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 ANKRD26P1Q6NSI1 321 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 QSOX2Q6ZRP7 698 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 GK5Q6ZS86 529 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 MSANTD1Q6ZTZ1 278 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 OR4K14Q8NGD5 310 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 RP9Q8TA86 221 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 SPDL1Q96EA4 605 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 CNRIP1Q96F85 164 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 DUSP26Q9BV47 211 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 SLC35C2Q9NQQ7 365 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 PRTFDC1Q9NRG1 225 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 ATAD3AQ9NVI7 634 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 HPF1Q9NWY4 346 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 SH3BP4Q9P0V3 963 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 UTS2RQ9UKP6 389 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 PSME2Q9UL46 239 aa12.7□□□□□ -0.38
SHKBP1-218ENST00000598907 A0A1B0GVC2 190 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 A0A1W2PP18 115 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 B4GALT2O60909 372 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 LDB3O75112 727 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 GLSO94925 669 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 DDX5P17844 614 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 PPP2R1BP30154 601 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 S100A3P33764 101 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 SORDQ00796 357 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 BIKQ13323 160 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 MLC1Q15049 377 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 MAPRE2Q15555 327 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 OR4F3Q6IEY1 312 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 IL20RBQ6UXL0 311 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 C7orf57Q8NEG2 295 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 EXOSC8Q96B26 276 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 LIN28AQ9H9Z2 209 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 NECTIN3Q9NQS3 549 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 ACSS1Q9NUB1 689 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 ARL8BQ9NVJ2 186 aa12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 FAM120CQ9NX05 1096 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 NUP214P35658 2090 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-218ENST00000598907 TRGV5A0A0B4J1U4 118 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 PRSS51A0A1B0GVH4 220 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 A0A1W2PS29 197 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 CCDC154A6NI56 674 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 NR5A2O00482 541 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 RNASET2O00584 256 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 FBP2O00757 339 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 CFLARO15519 480 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 ERAL1O75616 437 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 OR6B1O95007 311 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 T-ENOLP0DO92 83 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 COX4I1P13073 169 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 MAOAP21397 527 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 DNASE1L1P49184 302 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 XKP51811 444 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 DUSP2Q05923 314 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 RUNX1T1Q06455 604 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 CYLC2Q14093 348 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 VPS26BQ4G0F5 336 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 SNX32Q86XE0 403 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 OR4N5Q8IXE1 308 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 SAMD14Q8IZD0 417 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 NFAM1Q8NET5 270 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 ASB15Q8WXK1 588 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 CIDECQ96AQ7 238 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 VPS33AQ96AX1 596 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 KLHL29Q96CT2 875 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 CMTM5Q96DZ9 223 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 PTCHD1Q96NR3 888 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 CCDC115Q96NT0 180 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 OR52E6Q96RD3 313 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 SERHLQ9NQF3 203 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 C6orf203Q9P0P8 240 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 BTNL2Q9UIR0 455 aa12.68□□□□□ -0.38
SHKBP1-218ENST00000598907 KIAA1549Q9HCM3 1950 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms