RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 LINC01387J3KSC0 135 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 EMC8O43402 210 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 HCRTR2O43614 444 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 SCO2O43819 266 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 BPGMP07738 259 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 TMIGD3P0DMS9 266 aaPredicted RBP16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 PEPDP12955 493 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 UQCRC1P31930 480 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 ETV4P43268 484 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 STARP49675 285 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 PRR5P85299 388 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 SRYQ05066 204 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 GLYR1Q49A26 553 aaPredicted RBP16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 ZCCHC23Q6ZST2 131 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 NUP43Q8NFH3 380 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 GOT1L1Q8NHS2 421 aaPredicted RBP16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 GIMAP5Q96F15 307 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 SFXN3Q9BWM7 321 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 ACBD3Q9H3P7 528 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 PTGES2Q9H7Z7 377 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 FLRT3Q9NZU0 649 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 CLCF1Q9UBD9 225 aa16.24■□□□□ 0.19
CHMP2A-203ENST00000597209 IGLV3-32A0A0A0MS00 114 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 GXYLT2A0PJZ3 443 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 FAM221AA4D161 298 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 CLCA1A8K7I4 914 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 ZNF500O60304 480 aaPredicted RBP16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 ZWINTO95229 277 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 UTS2O95399 124 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 IGKV1D-16P01601 117 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 CREB1P16220 341 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 LCN1P31025 176 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 ARRB2P32121 409 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 HPCAL1P37235 193 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 DGKQP52824 942 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 C17orf67Q0P5P2 114 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 ATP6AP1LQ52LC2 224 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 EXOSC6Q5RKV6 272 aaKnown RBP16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 KIF18BQ86Y91 864 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 NATD1Q8N6N6 113 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 CLHC1Q8NHS4 586 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 FAM110BQ8TC76 370 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 GPR151Q8TDV0 419 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 FAM222BQ8WU58 562 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 DOCK7Q96N67 2140 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 MS4A4EQ96PG1 132 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 RTN4RQ9BZR6 473 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 MED11Q9P086 117 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 ZDHHC2Q9UIJ5 367 aa16.23■□□□□ 0.19
CHMP2A-203ENST00000597209 POLQO75417 2590 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 C17orf51A8MQB3 221 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 SCAMP2O15127 329 aaKnown RBP16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 CTIFO43310 598 aaKnown RBP16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 LYPLA1O75608 230 aaPredicted RBP16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 CTAG2O75638 210 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 NGFRP08138 427 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 HK1P19367 917 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 PRKAG1P54619 331 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 SORDQ00796 357 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 TESK1Q15569 626 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 FLYWCH1Q4VC44 716 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 C6orf136Q5SQH8 315 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 MARCH3Q86UD3 253 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 TMEM200AQ86VY9 491 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 DUSP19Q8WTR2 217 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 PIK3R3Q92569 461 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 C1GALT1C1Q96EU7 318 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 RMND5BQ96G75 393 aaPredicted RBP16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 ZIM3Q96PE6 472 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 TBL1XR1Q9BZK7 514 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 SSU72Q9NP77 194 aaKnown RBP16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 EQTNQ9NQ60 294 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 CRIM1Q9NZV1 1036 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 ITGB1BP2Q9UKP3 347 aa16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 RPH3AQ9Y2J0 694 aaPredicted RBP16.22■□□□□ 0.19
CHMP2A-203ENST00000597209 MED12Q93074 2177 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 PEX11AO75192 247 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 ANGPTL1O95841 491 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 CRHP06850 196 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 ACP2P11117 423 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 POU3F2P20265 443 aaPredicted RBP16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 EEFSECP57772 596 aaKnown RBP16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 FOXF2Q12947 444 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 DAZAP2Q15038 168 aaPredicted RBP16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 GRAMD1BQ3KR37 738 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 MFSD12Q6NUT3 480 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 NUDCD3Q8IVD9 361 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 ZZZ3Q8IYH5 903 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 MEIOBQ8N635 442 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 PSMA8Q8TAA3 256 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 AGR3Q8TD06 166 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 SLC9A6Q92581 669 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 C3orf30Q96M34 536 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 PIGQQ9BRB3 760 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 PARD6BQ9BYG5 372 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 PIGMQ9H3S5 423 aa16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 SIRT3Q9NTG7 399 aaPredicted RBP16.21■□□□□ 0.19
CHMP2A-203ENST00000597209 GIN1Q9NXP7 522 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms