RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FGD2Q7Z6J4 655 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 ANKRD46Q86W74 232 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 DOLPP1Q86YN1 238 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 CHERPQ8IWX8 916 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 OR5AK3PQ8NH89 298 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 NEIL3Q8TAT5 605 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 RNF138Q8WVD3 245 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 STON2Q8WXE9 905 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 TEX37Q96LM6 180 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 UBQLN3Q9H347 655 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 TP63Q9H3D4 680 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 RMND5AQ9H871 391 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 GPATCH2Q9NW75 528 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 PPP4R1LQ9P1A2 415 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 TINAGQ9UJW2 476 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 FLNBO75369 2602 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 E9PLN8 166 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 SCO2O43819 266 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 AK1P00568 194 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 HPGDP15428 266 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 IL12AP29459 219 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 CHI3L1P36222 383 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 DGKQP52824 942 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 GXYLT1Q4G148 440 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 TMEM211Q6ICI0 200 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 RPTNQ6XPR3 784 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 MSANTD1Q6ZTZ1 278 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 CD163Q86VB7 1156 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 WDSUB1Q8N9V3 476 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 OR4K17Q8NGC6 315 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 GOT1L1Q8NHS2 421 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 CDS1Q92903 461 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 SLC35G5Q96KT7 338 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 MARK4Q96L34 752 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 PANX1Q96RD7 426 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 VKORC1Q9BQB6 163 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 HOXD1Q9GZZ0 328 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 EXD2Q9NVH0 621 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 LIPGQ9Y5X9 500 aa15.77■□□□□ 0.12
SHKBP1-212ENST00000596163 FAM234BA2RU67 622 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 EDF1O60869 148 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 IGKV1D-16P01601 117 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 NGFRP08138 427 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 HOXD4P09016 255 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 TRPC1P48995 793 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 MRPL19P49406 292 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 ANXA11P50995 505 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 POLR2JP52435 117 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 SMSP52788 366 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 GAS1P54826 345 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 TXNL4AP83876 142 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 C17orf67Q0P5P2 114 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 FIGNL1Q6PIW4 674 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 OR7D2Q96RA2 312 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 SLC6A15Q9H2J7 730 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 PTGES2Q9H7Z7 377 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 SERHLQ9NQF3 203 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 UBQLN4Q9NRR5 601 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 TMEM45AQ9NWC5 275 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 MEMO1Q9Y316 297 aa15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 MRPS18CQ9Y3D5 142 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-212ENST00000596163 C15orf38-AP3S2A0A0A6YYH1 394 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 CCDC154A6NI56 674 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 FIGNL2A6NMB9 653 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 SCDO00767 359 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 ZNHIT1O43257 154 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 TBXA2RP21731 343 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 SRD5A2P31213 254 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 SF3B4Q15427 424 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■■■ 60
SHKBP1-212ENST00000596163 GRAMD1BQ3KR37 738 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 DCST2Q5T1A1 773 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 ATAD3BQ5T9A4 648 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 ZNF621Q6ZSS3 439 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 MARCH3Q86UD3 253 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 ZNF527Q8NB42 609 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 OR14L1PQ8NHC6 308 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 MIPOL1Q8TD10 442 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 DUSP19Q8WTR2 217 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 PHF10Q8WUB8 498 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 NEURL3Q96EH8 262 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 OTUB1Q96FW1 271 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 ITCHQ96J02 903 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 EBF4Q9BQW3 602 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 SLC35A5Q9BS91 424 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 RABEP2Q9H5N1 569 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 DKKL1Q9UK85 242 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 TRIM33Q9UPN9 1127 aa15.75■□□□□ 0.11
SHKBP1-212ENST00000596163 FLNCQ14315 2725 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 ZGRF1Q86YA3 2104 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 ALG1L2C9J202 215 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 C9JVG2 144 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 RFXANKO14593 260 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 NDUFB5O43674 189 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 WDR1O75083 606 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 ANP32DO95626 131 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 KRT75O95678 551 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 ANGPTL1O95841 491 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 GABRA1P14867 456 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 PTGER4P35408 488 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 ATP4BP51164 291 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms