RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 C10orf107Q8IVU9 208 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 CCDC116Q8IYX3 515 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 LRRC75A-AS1Q8N1F1 130 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 MEIOBQ8N635 442 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 OR9A2Q8NGT5 310 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 KAT2AQ92830 837 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 EXOSC8Q96B26 276 aaKnown RBP13.32□□□□□ -0.28
PNKP-202ENST00000593706 EFHD2Q96C19 240 aaPredicted RBP13.32□□□□□ -0.28
PNKP-202ENST00000593706 ERP27Q96DN0 273 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 COX4I2Q96KJ9 171 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 Q96MF0 132 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 TMEM109Q9BVC6 243 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 PPP4R1LQ9P1A2 415 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 MRPS18CQ9Y3D5 142 aaKnown RBP13.32□□□□□ -0.28
PNKP-202ENST00000593706 OR10H1Q9Y4A9 318 aa13.32□□□□□ -0.28
PNKP-202ENST00000593706 COL6A5A8TX70 2615 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 NPIPB8E9PQR5 432 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 SEC14L5O43304 696 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 SCO2O43819 266 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 TSPAN2O60636 221 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 NME6O75414 186 aaPredicted RBP13.31□□□□□ -0.28
PNKP-202ENST00000593706 LY6G6DO95868 133 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 CT45A8P0DMV1 189 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 CT45A9P0DMV2 189 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 PEPDP12955 493 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 POU2F1P14859 743 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 CD79BP40259 229 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 MC3RP41968 323 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 ACSM2AQ08AH3 577 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 CT45A2Q5DJT8 189 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 ACSM2BQ68CK6 577 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 RNF165Q6ZSG1 346 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
PNKP-202ENST00000593706 SAMD14Q8IZD0 417 aaPredicted RBP13.31□□□□□ -0.28
PNKP-202ENST00000593706 C16orf78Q8WTQ4 265 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 STARD4Q96DR4 205 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 ARSGQ96EG1 525 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 PERPQ96FX8 193 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 PGM2Q96G03 612 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 VSTM2LQ96N03 204 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 WFIKKN1Q96NZ8 548 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 PIP5K1AQ99755 562 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 GATA5Q9BWX5 397 aaPredicted RBP13.31□□□□□ -0.28
PNKP-202ENST00000593706 ROPN1BQ9BZX4 212 aaPredicted RBP13.31□□□□□ -0.28
PNKP-202ENST00000593706 OPN3Q9H1Y3 402 aaPredicted RBP13.31□□□□□ -0.28
PNKP-202ENST00000593706 ROPN1Q9HAT0 212 aaPredicted RBP13.31□□□□□ -0.28
PNKP-202ENST00000593706 FOLH1BQ9HBA9 442 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 ATRQ13535 2644 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 USF3Q68DE3 2245 aa13.31□□□□□ -0.28
PNKP-202ENST00000593706 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 PRR14LQ5THK1 2151 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 TLDC2A0PJX2 215 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 DEFB108AA8MXU0 73 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 SIAH2O43255 324 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 RSL1D1O76021 490 aaKnown RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 CRYGSP22914 178 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 PRPH2P23942 346 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 EVI2BP34910 448 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 PNLIPRP2P54317 469 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 DSCR4P56555 118 aaPredicted RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 EEFSECP57772 596 aaKnown RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 STX5Q13190 355 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 KIAA0040Q15053 153 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 PRSS53Q2L4Q9 553 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 SH2D4BQ5SQS7 431 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 NPSR1Q6W5P4 371 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 YTHDF3Q7Z739 585 aaKnown RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 FAM9CQ8IZT9 166 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 ZC3HAV1LQ96H79 300 aaKnown RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 ZNF845Q96IR2 970 aaPredicted RBP13.3□□□□□ -0.28
PNKP-202ENST00000593706 FCRL1Q96LA6 429 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 SLC39A3Q9BRY0 314 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 TRMOQ9BU70 441 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 BDH2Q9BUT1 245 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 EBPLQ9BY08 206 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 TAS2R9Q9NYW1 312 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 SLC17A7Q9P2U7 560 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 MID2Q9UJV3 735 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 RAB21Q9UL25 225 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 PTGDR2Q9Y5Y4 395 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 MXRA5Q9NR99 2828 aa13.3□□□□□ -0.28
PNKP-202ENST00000593706 C17orf51A8MQB3 221 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 ESPNB1AK53 854 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 H3BML4 177 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 TYROBPO43914 113 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 ZIC3O60481 467 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 TRIM13O60858 407 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 ANXA4P09525 319 aaPredicted RBP13.29□□□□□ -0.28
PNKP-202ENST00000593706 UROSP10746 265 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 CREB1P16220 341 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 HK1P19367 917 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 PCSK6P29122 969 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 ALDH3A1P30838 453 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 ARRB2P32121 409 aa13.29□□□□□ -0.28
PNKP-202ENST00000593706 CCKARP32238 428 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms