RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 PGM2Q96G03 612 aa13.87□□□□□ -0.19
TRIM28-203ENST00000593582 RMND5BQ96G75 393 aaPredicted RBP13.87□□□□□ -0.19
TRIM28-203ENST00000593582 SFXN2Q96NB2 322 aa13.87□□□□□ -0.19
TRIM28-203ENST00000593582 TBL1XR1Q9BZK7 514 aa13.87□□□□□ -0.19
TRIM28-203ENST00000593582 CALHM2Q9HA72 323 aa13.87□□□□□ -0.19
TRIM28-203ENST00000593582 SLC24A3Q9HC58 644 aa13.87□□□□□ -0.19
TRIM28-203ENST00000593582 FLRT3Q9NZU0 649 aa13.87□□□□□ -0.19
TRIM28-203ENST00000593582 ZNF629Q9UEG4 869 aaPredicted RBP13.87□□□□□ -0.19
TRIM28-203ENST00000593582 CREBBPQ92793 2442 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 A0A1W2PRB8 838 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 GXYLT2A0PJZ3 443 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 ENO4A6NNW6 628 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 KDM4EB2RXH2 506 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-203ENST00000593582 H0Y3Z8 333 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 ZIC3O60481 467 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 NKX2-2O95096 273 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 UTS2O95399 124 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 DHRS4L1P0CG22 281 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 LAMP1P11279 417 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 CHMP24386 653 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 CEACAM8P31997 349 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-203ENST00000593582 MAP3K8P41279 467 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 WNT3P56703 355 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 TLE4Q04727 773 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 SRYQ05066 204 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 STX5Q13190 355 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 PDCD2Q16342 344 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-203ENST00000593582 MFSD12Q6NUT3 480 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 ZCCHC12Q6PEW1 402 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 DMRTC2Q8IXT2 367 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-203ENST00000593582 KIRREL3Q8IZU9 778 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 ZNF781Q8N8C0 355 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 FADS6Q8N9I5 356 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 GIMAP5Q96F15 307 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 LRRC46Q96FV0 321 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 LURAP1Q96LR2 239 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 DSN1Q9H410 356 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 PTGES2Q9H7Z7 377 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 ZCCHC3Q9NUD5 404 aaKnown RBP13.86□□□□□ -0.19
TRIM28-203ENST00000593582 RPH3AQ9Y2J0 694 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-203ENST00000593582 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-203ENST00000593582 RAP2CQ9Y3L5 183 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 SNX8Q9Y5X2 465 aa13.86□□□□□ -0.19
TRIM28-203ENST00000593582 MBD3L4A6NDZ8 208 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 MBD3L3A6NE82 208 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 MBD3L5A6NJ08 208 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 C17orf51A8MQB3 221 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 ERLIN1O75477 346 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 ALOX5P09917 674 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 TCEA1P23193 301 aaKnown RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 SLC1A6P48664 564 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 PRIM2P49643 509 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 LHX2P50458 406 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 RPL14P50914 215 aaKnown RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 EMX2Q04743 252 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 C17orf67Q0P5P2 114 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 MPP2Q14168 576 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 SMU1Q2TAY7 513 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 LSM12Q3MHD2 195 aaKnown RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 MARCH3Q86UD3 253 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 KRTCAP2Q8N6L1 136 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 SLC16A11Q8NCK7 471 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 NAXEQ8NCW5 288 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 OR2M3Q8NG83 312 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 MBD3L2Q8NHZ7 208 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 FBXO30Q8TB52 745 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 DUSP19Q8WTR2 217 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 OR5P2Q8WZ92 322 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 JADE3Q92613 823 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 FAM120BQ96EK7 910 aaKnown RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 CHMP6Q96FZ7 201 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 C16orf58Q96GQ5 468 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 PPP1R36Q96LQ0 422 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 PAIP2Q9BPZ3 127 aaKnown RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 TUBA1CQ9BQE3 449 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 BHLHE41Q9C0J9 482 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 ZNF395Q9H8N7 513 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 MCCC2Q9HCC0 563 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 HHATLQ9HCP6 504 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 SIRT3Q9NTG7 399 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 NOP53Q9NZM5 478 aaKnown RBP13.85□□□□□ -0.19
TRIM28-203ENST00000593582 MED11Q9P086 117 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 FREM3P0C091 2139 aa13.85□□□□□ -0.19
TRIM28-203ENST00000593582 B4DXG7 233 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 KCNK2O95069 426 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 IGKV1D-16P01601 117 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 HMGN2P05204 90 aaKnown RBP13.84□□□□□ -0.19
TRIM28-203ENST00000593582 ACP2P11117 423 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 G6PDP11413 515 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 HK1P19367 917 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 BGNP21810 368 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 STARP49675 285 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 DGKQP52824 942 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 DIO3P55073 304 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 STX3Q13277 289 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 DUSP5Q16690 384 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 GRAMD1BQ3KR37 738 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 SPDYE7PQ495Y7 208 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms