RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PPP1R14CQ8TAE6 165 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 ZPLD1Q8TCW7 415 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 GPR151Q8TDV0 419 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 NUDT8Q8WV74 236 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 HOXB13Q92826 284 aaPredicted RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 DTNBP1Q96EV8 351 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 GIMAP5Q96F15 307 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 RMND5BQ96G75 393 aaPredicted RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 ZIM3Q96PE6 472 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 MS4A4EQ96PG1 132 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 DSN1Q9H410 356 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 ZNF395Q9H8N7 513 aaPredicted RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 C3orf14Q9HBI5 128 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 FAM120CQ9NX05 1096 aaKnown RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 MED11Q9P086 117 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 NTMQ9P121 344 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 RPH3AQ9Y2J0 694 aaPredicted RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 PDZD2O15018 2839 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 EMC8O43402 210 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 KCNH1O95259 989 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 HSPA4LO95757 839 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 LAMP1P11279 417 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 LHX2P50458 406 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 AGFG1P52594 562 aaKnown RBP12.58□□□□□ -0.4
APOC1-208ENST00000592535 PSMD4P55036 377 aaKnown RBP12.58□□□□□ -0.4
APOC1-208ENST00000592535 DSCR4P56555 118 aaPredicted RBP12.58□□□□□ -0.4
APOC1-208ENST00000592535 B3GALT5-AS1P59052 145 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 CHI3L2Q15782 390 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 IL23RQ5VWK5 629 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 MFSD12Q6NUT3 480 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 AAGABQ6PD74 315 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 GALNT10Q86SR1 603 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 MARCH3Q86UD3 253 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 CDRT4Q8N9R6 151 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 FNDC5Q8NAU1 212 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 SLC9A6Q92581 669 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 TUBGCP3Q96CW5 907 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 OTUB1Q96FW1 271 aaPredicted RBP12.58□□□□□ -0.4
APOC1-208ENST00000592535 C16orf58Q96GQ5 468 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 SH3GL2Q99962 352 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 ZNF559Q9BR84 538 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 G6PC3Q9BUM1 346 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 CENPHQ9H3R5 247 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 CALHM2Q9HA72 323 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 SSU72Q9NP77 194 aaKnown RBP12.58□□□□□ -0.4
APOC1-208ENST00000592535 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
APOC1-208ENST00000592535 ZNF629Q9UEG4 869 aaPredicted RBP12.58□□□□□ -0.4
APOC1-208ENST00000592535 L3MBTL1Q9Y468 752 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 DCHS2Q6V1P9 2916 aa12.58□□□□□ -0.4
APOC1-208ENST00000592535 A0A1W2PRB8 838 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 CLCA1A8K7I4 914 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 SERPINE1P05121 402 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 DHRS4L1P0CG22 281 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 ZNF708P17019 499 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 DDX5P17844 614 aaKnown RBP12.57□□□□□ -0.4
APOC1-208ENST00000592535 HK1P19367 917 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 CHMP24386 653 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 UQCRC1P31930 480 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 RPL3P39023 403 aaKnown RBP12.57□□□□□ -0.4
APOC1-208ENST00000592535 CLK3P49761 638 aaKnown RBP12.57□□□□□ -0.4
APOC1-208ENST00000592535 ASCL1P50553 236 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 CLDN18P56856 261 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 MYBPHQ13203 477 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 MPP2Q14168 576 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 MLC1Q15049 377 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 DUSP5Q16690 384 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 VPS26BQ4G0F5 336 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 TNFAIP8L3Q5GJ75 292 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 EXOSC6Q5RKV6 272 aaKnown RBP12.57□□□□□ -0.4
APOC1-208ENST00000592535 ARSKQ6UWY0 536 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 APOOLQ6UXV4 268 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 KRTCAP2Q8N6L1 136 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 ZNF781Q8N8C0 355 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 SLC16A11Q8NCK7 471 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 DUSP19Q8WTR2 217 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 FAM120BQ96EK7 910 aaKnown RBP12.57□□□□□ -0.4
APOC1-208ENST00000592535 PPP1R36Q96LQ0 422 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 YIPF4Q9BSR8 244 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 TBL1XR1Q9BZK7 514 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 C20orf27Q9GZN8 174 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 ZCCHC3Q9NUD5 404 aaKnown RBP12.57□□□□□ -0.4
APOC1-208ENST00000592535 KCNN3Q9UGI6 736 aa12.57□□□□□ -0.4
APOC1-208ENST00000592535 SYT5O00445 386 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 TM9SF1O15321 606 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 BIRC5O15392 142 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 ANGPTL1O95841 491 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 ALOX5P09917 674 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
APOC1-208ENST00000592535 CTSSP25774 331 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 PRIM2P49643 509 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 DGKQP52824 942 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 ABCE1P61221 599 aaKnown RBP12.56□□□□□ -0.4
APOC1-208ENST00000592535 PRR5P85299 388 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 FOXF2Q12947 444 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 PDCD2Q16342 344 aaPredicted RBP12.56□□□□□ -0.4
APOC1-208ENST00000592535 CPTPQ5TA50 214 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms