RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 PMM1Q92871 262 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 ZNF347Q96SE7 839 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 BARD1Q99728 777 aaKnown RBP10.53□□□□□ -0.72
TUBD1-211ENST00000591548 SEMA4CQ9C0C4 833 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 NXF5Q9H1B4 397 aaKnown RBP10.53□□□□□ -0.72
TUBD1-211ENST00000591548 RLIMQ9NVW2 624 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 COPS7AQ9UBW8 275 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 ZNF223Q9UK11 482 aaPredicted RBP10.53□□□□□ -0.72
TUBD1-211ENST00000591548 PADI1Q9ULC6 663 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 CBLCQ9ULV8 474 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 PPIEQ9UNP9 301 aaKnown RBP10.53□□□□□ -0.72
TUBD1-211ENST00000591548 CFL2Q9Y281 166 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 ZNF443Q9Y2A4 671 aaPredicted RBP10.53□□□□□ -0.72
TUBD1-211ENST00000591548 IFT52Q9Y366 437 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 PTRH2Q9Y3E5 179 aaKnown RBP10.53□□□□□ -0.72
TUBD1-211ENST00000591548 OR10H1Q9Y4A9 318 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 TESMINQ9Y4I5 508 aa10.53□□□□□ -0.72
TUBD1-211ENST00000591548 C2orf92A0A1B0GVN3 265 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 H0YJX3 145 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 SYT5O00445 386 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 DLGAP1O14490 977 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 E2F6O75461 281 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 SEC24DO94855 1032 aaPredicted RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 DBIP07108 87 aaKnown RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 THBS1P07996 1170 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 IL7RP16871 459 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 RHCEP18577 417 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 CSRP1P21291 193 aaKnown RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 PRKACGP22612 351 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 RRM2P31350 389 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 EEF1A1P68104 462 aaKnown RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 LAPTM4AQ15012 233 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 TAF11Q15544 211 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 NPTX1Q15818 432 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 FLYWCH1Q4VC44 716 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 ANKRD34AQ69YU3 496 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 SHQ1Q6PI26 577 aaKnown RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 PAPD4Q6PIY7 484 aaKnown RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 ZNF836Q6ZNA1 936 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 ZNF605Q86T29 641 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 STK32CQ86UX6 486 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 MARCH9Q86YJ5 346 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 SVOPLQ8N434 492 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 OR6T1Q8NGN1 323 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 OR2Y1Q8NGV0 311 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 LCORQ96JN0 433 aaPredicted RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 ZNF597Q96LX8 424 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 PIP5K1AQ99755 562 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 ARHGDIGQ99819 225 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 NRSN2Q9GZP1 204 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 WWTR1Q9GZV5 400 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 VCXQ9H320 206 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 REEP1Q9H902 201 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 ZNF232Q9UNY5 417 aa10.52□□□□□ -0.72
TUBD1-211ENST00000591548 SAMHD1Q9Y3Z3 626 aaKnown RBP10.52□□□□□ -0.72
TUBD1-211ENST00000591548 LOC102723996A0A087X1L8 192 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 CDC14CA4D256 554 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 FRG2CA6NGY1 282 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 OR6C76A6NM76 312 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 NPIPB9F8W1W9 429 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 ADAMDEC1O15204 470 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 FRS3O43559 492 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 TPST2O60704 377 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 CCNYL3P0C7X3 344 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 NID1P14543 1247 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 ATP6V1C1P21283 382 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 DNAJA1P31689 397 aaKnown RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 RNF144AP50876 292 aaPredicted RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 DCAF7P61962 342 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 RNF4P78317 190 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 PPP2R2BQ00005 443 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 PLAURQ03405 335 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 GANABQ14697 944 aaKnown RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 LARS2Q15031 903 aaKnown RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 WLSQ5T9L3 541 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 TMEM164Q5U3C3 297 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 DEF8Q6ZN54 512 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 TSPYL5Q86VY4 417 aaPredicted RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 ZNF441Q8N8Z8 693 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 OR4C15Q8NGM1 316 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 MAGEE2Q8TD90 523 aaPredicted RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 GAL3ST4Q96RP7 486 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 EPYCQ99645 322 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 LPAR4Q99677 370 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 G6PC3Q9BUM1 346 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 PRR14Q9BWN1 585 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 SMURF2Q9HAU4 748 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 ACER3Q9NUN7 267 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 RHCGQ9UBD6 479 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 C19orf25Q9UFG5 118 aaPredicted RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 KCND3Q9UK17 655 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 ACAD8Q9UKU7 415 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 SLC9A8Q9Y2E8 581 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 FAM32AQ9Y421 112 aaKnown RBP10.52□□□□□ -0.73
TUBD1-211ENST00000591548 LYVE1Q9Y5Y7 322 aa10.52□□□□□ -0.73
TUBD1-211ENST00000591548 RIF1Q5UIP0 2472 aaKnown RBP10.51□□□□□ -0.73
TUBD1-211ENST00000591548 BCAS1O75363 584 aaPredicted RBP10.51□□□□□ -0.73
TUBD1-211ENST00000591548 TNFSF15O95150 251 aa10.51□□□□□ -0.73
TUBD1-211ENST00000591548 ALPLP05186 524 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms