RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 FAM110BQ8TC76 370 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 TESCQ96BS2 214 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 CHMP6Q96FZ7 201 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 CCDC120Q96HB5 630 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 TMEM41AQ96HV5 264 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 PSMG3-AS1Q96PY0 264 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 KLHDC3Q9BQ90 382 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 SLC6A13Q9NSD5 602 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 PNPLA3Q9NST1 481 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 KIAA1549Q9HCM3 1950 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 TRGV5A0A0B4J1U4 118 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 RNF103-CHMP3A0A140T963 221 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 A0A1B0GVC2 190 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 PRSS51A0A1B0GVH4 220 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 KDM4EB2RXH2 506 aaPredicted RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 RNASET2O00584 256 aaKnown RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 UBDO15205 165 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 GMFGO60234 142 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 DDX5P17844 614 aaKnown RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 CLNS1AP54105 237 aaKnown RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 RPP38P78345 283 aaKnown RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 PRR5P85299 388 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 ADORA2A-AS1P86434 159 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 TOMM20Q15388 145 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 CDSNQ15517 529 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 GXYLT1Q4G148 440 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 DCST1Q5T197 706 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 CDC73Q6P1J9 531 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 ARHGAP11AQ6P4F7 1023 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 TMEM81Q6P7N7 255 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 LSRQ86X29 649 aaPredicted RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 MARVELD2Q8N4S9 558 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 COX18Q8N8Q8 333 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 GATSQ8NAP1 163 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 OR56A1Q8NGH5 318 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 OR1J4Q8NGS1 313 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 OR4C3Q8NH37 302 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 SFXN5Q8TD22 340 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 TMCO6Q96DC7 493 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 OR7D2Q96RA2 312 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 OR52E6Q96RD3 313 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 ACTRT3Q9BYD9 372 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 LDAHQ9H6V9 325 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 EXO5Q9H790 373 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 TCF7L2Q9NQB0 619 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 SDR39U1Q9NRG7 319 aaPredicted RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 GIN1Q9NXP7 522 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 MED11Q9P086 117 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 DCTN4Q9UJW0 460 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 WIF1Q9Y5W5 379 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 ADGRG4Q8IZF6 3080 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 CELSR2Q9HCU4 2923 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 HEATR5AQ86XA9 2040 aa10.5□□□□□ -0.73
VMP1-211ENST00000591315 PHF3Q92576 2039 aaKnown RBP10.5□□□□□ -0.73
VMP1-211ENST00000591315 PKDREJQ9NTG1 2253 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 A0A1B0GUH1 482 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 CYSRT1A8MQ03 144 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 OIP5O43482 229 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 EDF1O60869 148 aaKnown RBP10.49□□□□□ -0.73
VMP1-211ENST00000591315 SLC22A3O75751 556 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 CLDN1O95832 211 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 HPNP05981 417 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 PGRP06401 933 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 IDO1P14902 403 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 COL8A1P27658 744 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 PRIM2P49643 509 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 POU6F2P78424 691 aaPredicted RBP10.49□□□□□ -0.73
VMP1-211ENST00000591315 GUCY1A3Q02108 690 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 GTDC1Q4AE62 458 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 ANXA8L1Q5VT79 327 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 DNAJC14Q6Y2X3 702 aaPredicted RBP10.49□□□□□ -0.73
VMP1-211ENST00000591315 ACAD11Q709F0 780 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 PLCZ1Q86YW0 608 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 FUNDC1Q8IVP5 155 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 NATD1Q8N6N6 113 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 FAM83FQ8NEG4 500 aaPredicted RBP10.49□□□□□ -0.73
VMP1-211ENST00000591315 NEIL3Q8TAT5 605 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 DUSP19Q8WTR2 217 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 RAB8BQ92930 207 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 VPS33AQ96AX1 596 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 CCDC115Q96NT0 180 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 BTBD2Q9BX70 525 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 ACBD3Q9H3P7 528 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 DSN1Q9H410 356 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 PIGUQ9H490 435 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 NPHS2Q9NP85 383 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 ACKR4Q9NPB9 350 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 RYDENQ9NUL5 291 aaKnown RBP10.49□□□□□ -0.73
VMP1-211ENST00000591315 FAM120CQ9NX05 1096 aaKnown RBP10.49□□□□□ -0.73
VMP1-211ENST00000591315 MEMO1Q9Y316 297 aa10.49□□□□□ -0.73
VMP1-211ENST00000591315 C15orf38-AP3S2A0A0A6YYH1 394 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 CENPVL1A0A0U1RR11 272 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 PRAMEF27A3QJZ7 478 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 CCDC154A6NI56 674 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 TTC36A6NLP5 189 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 SHISA8B8ZZ34 492 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 AQP7O14520 342 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 PRRG2O14669 202 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 POLR3GO15318 223 aaPredicted RBP10.48□□□□□ -0.73
VMP1-211ENST00000591315 ZIC3O60481 467 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms