RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PLCXD1Q9NUJ7 323 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 COPS7AQ9UBW8 275 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 A0A1B0GVC2 190 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 A6NIN4 97 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 KHNYNO15037 678 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 ATF4P18848 351 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 MAPK3P27361 379 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 HOXC8P31273 242 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 MLLT3P42568 568 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 KCNJ5P48544 419 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 SHC2P98077 582 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 RUNX3Q13761 415 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 TOMM20Q15388 145 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 ANKRD54Q6NXT1 300 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF559Q9BR84 538 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 HIDE1A8MVS5 230 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 SOX30O94993 753 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 CSTAP01040 98 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 IGFBP1P08833 259 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 CLEC2LP0C7M8 214 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 ACTA2P62736 377 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 ACTG2P63267 376 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 SLX4IPQ5VYV7 408 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 OR51L1Q8NGJ5 315 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 OR52I1Q8NGK6 324 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 HYLS1Q96M11 299 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 WDR92Q96MX6 357 aa16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 POLDIP3Q9BY77 421 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-215ENST00000590574 M0R233 179 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 PGGHGQ32M88 737 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 PGBD2Q6P3X8 592 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 FAM180AQ6UWF9 173 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 Q6ZNB5 142 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 METTL27Q8N6F8 245 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 HCAR2Q8TDS4 363 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 GPER1Q99527 375 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 B3GNT4Q9C0J1 378 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 DIMT1Q9UNQ2 313 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 GXYLT2A0PJZ3 443 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 DNASE1P24855 282 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 ADAM8P78325 824 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 CHRNEQ04844 493 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 MS4A15Q8N5U1 240 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 THAP4Q8WY91 577 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 FKBP10Q96AY3 582 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 TBL1XR1Q9BZK7 514 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 K7ESM1 405 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 GABRPO00591 440 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 BLKP51451 505 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 TATDN3Q17R31 274 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 LRRC26Q2I0M4 334 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 PLK5Q496M5 336 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 TMEM239Q8WW34 195 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 SIAEQ9HAT2 523 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 TBC1D24Q9ULP9 559 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 RHPN2P1A8MT19 583 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 PLPP1O14494 284 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 TIMP1P01033 207 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 ALG10BQ5I7T1 473 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 TMEM69Q5SWH9 247 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 OR6N2Q8NGY6 317 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 THAP7Q9BT49 309 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 RDH8Q9NYR8 311 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 KLF8O95600 359 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 AIFM1O95831 613 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 MAN2A2P49641 1150 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 TSPAN31Q12999 210 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 KIAA0040Q15053 153 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 IRF4Q15306 451 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 C3orf38Q5JPI3 329 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 CCNJQ5T5M9 372 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 SFRP4Q6FHJ7 346 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 OR6C4Q8NGE1 309 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 SGTBQ96EQ0 304 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 NPAP1Q9NZP6 1156 aa16.1■□□□□ 0.17
SMARCA4-215ENST00000590574 WISP3O95389 354 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 IGFBP4P22692 258 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 GABRA5P31644 462 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 SNRPGP62308 76 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 PRSS36Q5K4E3 855 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF765Q7L2R6 523 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 CSNK1A1LQ8N752 337 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 NSMAFQ92636 917 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 INSM2Q96T92 566 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 DPCDQ9BVM2 203 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 IFT46Q9NQC8 304 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 ADAM29Q9UKF5 820 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 ASB4Q9Y574 426 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 TEX13CA0A0J9YWL9 993 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 UPK1AO00322 258 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 PRDX1Q06830 199 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 TP53I3Q53FA7 332 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 SLC16A12Q6ZSM3 486 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 ELMOD2Q8IZ81 293 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF619Q8N2I2 560 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 OR52D1Q9H346 318 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 GLIPR2Q9H4G4 154 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 MGAT4AQ9UM21 535 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF443Q9Y2A4 671 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms