RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 LRIG3Q6UXM1 1119 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 R3HCC1LQ7Z5L2 792 aaKnown RBP17.41■□□□□ 0.38
CCDC130-209ENST00000588809 CDRT4Q8N9R6 151 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 C9orf106Q8NAJ2 232 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 OR2M3Q8NG83 312 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 OR4K17Q8NGC6 315 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 CEP70Q8NHQ1 597 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 GIMAP5Q96F15 307 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 RTN4RQ9BZR6 473 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 SDHAF3Q9NRP4 125 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 JKAMPQ9P055 326 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCDC130-209ENST00000588809 ATP6V1HQ9UI12 483 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 ZDHHC2Q9UIJ5 367 aa17.41■□□□□ 0.38
CCDC130-209ENST00000588809 V9GYY5 206 aaPredicted RBP17.41■□□□□ 0.38
CCDC130-209ENST00000588809 IGLV3-32A0A0A0MS00 114 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 H0Y3Z8 333 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 SCAMP2O15127 329 aaKnown RBP17.4■□□□□ 0.38
CCDC130-209ENST00000588809 KCNH1O95259 989 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 DDX5P17844 614 aaKnown RBP17.4■□□□□ 0.38
CCDC130-209ENST00000588809 GABRA3P34903 492 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 OPRM1P35372 400 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 RPL3P39023 403 aaKnown RBP17.4■□□□□ 0.38
CCDC130-209ENST00000588809 ZNF844Q08AG5 666 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 MYBPHQ13203 477 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 BCL2A1Q16548 175 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 EXOSC6Q5RKV6 272 aaKnown RBP17.4■□□□□ 0.38
CCDC130-209ENST00000588809 C6orf136Q5SQH8 315 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 CDH24Q86UP0 819 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 NUP43Q8NFH3 380 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 AGR3Q8TD06 166 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 RNASE6Q93091 150 aaKnown RBP17.4■□□□□ 0.38
CCDC130-209ENST00000588809 WNT2BQ93097 391 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 LRRC46Q96FV0 321 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 C3orf30Q96M34 536 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 SFXN2Q96NB2 322 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 MS4A4EQ96PG1 132 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 TM9SF2Q99805 663 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 PARD6BQ9BYG5 372 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 EQTNQ9NQ60 294 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 CLCF1Q9UBD9 225 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 GIMAP2Q9UG22 337 aa17.4■□□□□ 0.38
CCDC130-209ENST00000588809 FOXD3Q9UJU5 478 aaPredicted RBP17.4■□□□□ 0.38
CCDC130-209ENST00000588809 GXYLT2A0PJZ3 443 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 HCRTR2O43614 444 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 RCBTB2O95199 551 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 IGKV1D-16P01601 117 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 NGFRP08138 427 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 HPCAL1P37235 193 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 PRR5P85299 388 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 KRT71Q3SY84 523 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 ATP6AP1LQ52LC2 224 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 MFSD12Q6NUT3 480 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 ZCCHC12Q6PEW1 402 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 GPR151Q8TDV0 419 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 PIK3R3Q92569 461 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 DSN1Q9H410 356 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 SSU72Q9NP77 194 aaKnown RBP17.39■□□□□ 0.37
CCDC130-209ENST00000588809 SIRT3Q9NTG7 399 aaPredicted RBP17.39■□□□□ 0.37
CCDC130-209ENST00000588809 RAB21Q9UL25 225 aa17.39■□□□□ 0.37
CCDC130-209ENST00000588809 CLCA1A8K7I4 914 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 EMC8O43402 210 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 PEX11AO75192 247 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 UTS2O95399 124 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 TMIGD3P0DMS9 266 aaPredicted RBP17.38■□□□□ 0.37
CCDC130-209ENST00000588809 ACP2P11117 423 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 UQCRC1P31930 480 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 SERPINB4P48594 390 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 STARP49675 285 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 CLK3P49761 638 aaKnown RBP17.38■□□□□ 0.37
CCDC130-209ENST00000588809 SRYQ05066 204 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 PTGR1Q14914 329 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC130-209ENST00000588809 GRAMD1BQ3KR37 738 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 APOOLQ6UXV4 268 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 SLC16A11Q8NCK7 471 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 PSMA8Q8TAA3 256 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 FAM110BQ8TC76 370 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 C1GALT1C1Q96EU7 318 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 RMND5BQ96G75 393 aaPredicted RBP17.38■□□□□ 0.37
CCDC130-209ENST00000588809 SFXN3Q9BWM7 321 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 PTGES2Q9H7Z7 377 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 RPH3AQ9Y2J0 694 aaPredicted RBP17.38■□□□□ 0.37
CCDC130-209ENST00000588809 HEATR5AQ86XA9 2040 aa17.38■□□□□ 0.37
CCDC130-209ENST00000588809 VPS13CQ709C8 3753 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 LINC01387J3KSC0 135 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 LYPLA1O75608 230 aaPredicted RBP17.37■□□□□ 0.37
CCDC130-209ENST00000588809 ZWINTO95229 277 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 KIR2DL3P43628 341 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 DGKQP52824 942 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 C17orf67Q0P5P2 114 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 TESK1Q15569 626 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 GLYR1Q49A26 553 aaPredicted RBP17.37■□□□□ 0.37
CCDC130-209ENST00000588809 FLYWCH1Q4VC44 716 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 TNFAIP8L3Q5GJ75 292 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 MARCH3Q86UD3 253 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 EXOC3L1Q86VI1 746 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 NUDCD3Q8IVD9 361 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 NATD1Q8N6N6 113 aa17.37■□□□□ 0.37
CCDC130-209ENST00000588809 OR7A2PQ8NGA2 310 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms