RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TMEM107Q6UX40 140 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 TRILQ7L0X0 811 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 GPALPP1Q8IXQ4 340 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 RNF113BQ8IZP6 322 aaKnown RBP17.38■□□□□ 0.37
DDX39A-206ENST00000587730 AMER3Q8N944 861 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 OR4Q3Q8NH05 313 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 AKAP1Q92667 903 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDX39A-206ENST00000587730 SLC41A3Q96GZ6 507 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 HYLS1Q96M11 299 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 C12orf66Q96MD2 445 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 SECISBP2Q96T21 854 aaKnown RBP17.38■□□□□ 0.37
DDX39A-206ENST00000587730 HDHD5Q9BXW7 423 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 TRIM36Q9NQ86 728 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 PRDM9Q9NQV7 894 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 PTTG3PQ9NZH4 202 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 PCDH10Q9P2E7 1040 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 ATG4BQ9Y4P1 393 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 PCYT1BQ9Y5K3 369 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-206ENST00000587730 IGKV1-8A0A0C4DH67 115 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 HIDE1A8MVS5 230 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 APOL3O95236 402 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 CHRM5P08912 532 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-206ENST00000587730 ALPPL2P10696 532 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 CEBPBP17676 345 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 SSTR4P31391 388 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 ERVFC1P60507 584 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 HOXC5Q00444 222 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 HSD17B12Q53GQ0 312 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 CLEC12AQ5QGZ9 265 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 SLC30A6Q6NXT4 461 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 NRROSQ86YC3 692 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 CCDC116Q8IYX3 515 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 OR4F15Q8NGB8 312 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 OR52L1Q8NGH7 329 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 OR5M3Q8NGP4 307 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 ADAMTS15Q8TE58 950 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 SPRYD4Q8WW59 207 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-206ENST00000587730 MS4A4EQ96PG1 132 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 MCHR1Q99705 422 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF649Q9BS31 505 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 YIPF4Q9BSR8 244 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 WDR26Q9H7D7 661 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 EVA1AQ9H8M9 152 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 CYSLTR2Q9NS75 346 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 BABAM2Q9NXR7 383 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 PTGFRNQ9P2B2 879 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 MRPS23Q9Y3D9 190 aaKnown RBP17.37■□□□□ 0.37
DDX39A-206ENST00000587730 COL4A3Q01955 1670 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 INMT-MINDY4F8WBC2 141 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 J3QRE1 110 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 GTPBP1O00178 669 aaKnown RBP17.37■□□□□ 0.37
DDX39A-206ENST00000587730 TNFRSF10AO00220 468 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 RNF13O43567 381 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 TIMP1P01033 207 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 THBS1P07996 1170 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 ARSBP15848 533 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 KRT33BQ14525 404 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 TCEAL5Q5H9L2 206 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 EOGTQ5NDL2 527 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 CXXC5Q7LFL8 322 aaKnown RBP17.37■□□□□ 0.37
DDX39A-206ENST00000587730 UBE2Q1Q7Z7E8 422 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 RANBP3LQ86VV4 465 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-206ENST00000587730 MFSD9Q8NBP5 474 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 OR8K5Q8NH50 307 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 C1QTNF2Q9BXJ5 285 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 B3GAT2Q9NPZ5 323 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 CTPS2Q9NRF8 586 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 PHPT1Q9NRX4 125 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-206ENST00000587730 PLSCR3Q9NRY6 295 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 NLKQ9UBE8 527 aa17.37■□□□□ 0.37
DDX39A-206ENST00000587730 A0A0G2JN53 185 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 PGRMC2O15173 223 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF780AO75290 641 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-206ENST00000587730 HK1P19367 917 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 CMPK1P30085 196 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 RFX3P48380 749 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 LSM11P83369 360 aaKnown RBP eCLIP17.36■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF57Q68EA5 555 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-206ENST00000587730 SDE2Q6IQ49 451 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 GDF7Q7Z4P5 450 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 GRASPQ7Z6J2 395 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-206ENST00000587730 VRK2Q86Y07 508 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 NRMQ8IXM6 262 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 NLGN4YQ8NFZ3 816 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-206ENST00000587730 ANGPTL6Q8NI99 470 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 GANCQ8TET4 914 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 UCN3Q969E3 161 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 C16orf58Q96GQ5 468 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 INSM2Q96T92 566 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-206ENST00000587730 AICDAQ9GZX7 198 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 RNF32Q9H0A6 362 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF443Q9Y2A4 671 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-206ENST00000587730 INSL6Q9Y581 213 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 HCFC2Q9Y5Z7 792 aa17.36■□□□□ 0.37
DDX39A-206ENST00000587730 DENND4AQ7Z401 1863 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 NOTOA8MTQ0 251 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 LALBAP00709 142 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 ACSL1P33121 698 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 SOX18P35713 384 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 MC3RP41968 323 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms