RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 EMC8O43402 210 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 ERN1O75460 977 aaKnown RBP17.09■□□□□ 0.33
ATG4D-203ENST00000585752 SLC22A3O75751 556 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 IFI6P09912 130 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 FRKP42685 505 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-203ENST00000585752 EMDP50402 254 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 UFM1P61960 85 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 PSPHP78330 225 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 SNTA1Q13424 505 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 HSPB2Q16082 182 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 PDCD4Q53EL6 469 aaKnown RBP17.09■□□□□ 0.33
ATG4D-203ENST00000585752 OR4F3Q6IEY1 312 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 CAMKMTQ7Z624 323 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 ULK2Q8IYT8 1036 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 ZNF295-AS1Q8N0V1 137 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 MIER2Q8N344 545 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 GLB1L3Q8NCI6 653 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-203ENST00000585752 CHMP6Q96FZ7 201 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 ZNF559Q9BR84 538 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 EQTNQ9NQ60 294 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 Q9UFV3 132 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 ITGB1BP2Q9UKP3 347 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 TRIM33Q9UPN9 1127 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 FAM215AQ9Y5M1 114 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 GPR45Q9Y5Y3 372 aa17.09■□□□□ 0.33
ATG4D-203ENST00000585752 UPK1AO00322 258 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 ABCB7O75027 752 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 TOXO94900 526 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 C6orf47O95873 294 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 IL2RAP01589 272 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 HPNP05981 417 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 ENDOUP21128 410 aaKnown RBP17.08■□□□□ 0.32
ATG4D-203ENST00000585752 MSX1P28360 303 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 CDK9P50750 372 aaKnown RBP17.08■□□□□ 0.32
ATG4D-203ENST00000585752 MRPS22P82650 360 aaKnown RBP17.08■□□□□ 0.32
ATG4D-203ENST00000585752 MYBPHQ13203 477 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 SLC25A35Q3KQZ1 300 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 FAM174BQ3ZCQ3 159 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 VPS26BQ4G0F5 336 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 RIPPLY2Q5TAB7 128 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 TIGD3Q6B0B8 471 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 RTL6Q6ICC9 239 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 BHLHB9Q6PI77 547 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 SLC44A2Q8IWA5 706 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-203ENST00000585752 OR2L13Q8N349 312 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 NUP43Q8NFH3 380 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 OR8J2Q8NGG1 315 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 OR4A15Q8NGL6 344 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 ABTB1Q969K4 478 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-203ENST00000585752 COL21A1Q96P44 957 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 MS4A4EQ96PG1 132 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 EBF4Q9BQW3 602 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 MCCC2Q9HCC0 563 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 ZCCHC3Q9NUD5 404 aaKnown RBP17.08■□□□□ 0.32
ATG4D-203ENST00000585752 FGFR1OP2Q9NVK5 253 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 ZIM2Q9NZV7 527 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 SLC6A5Q9Y345 797 aa17.08■□□□□ 0.32
ATG4D-203ENST00000585752 TTC36A6NLP5 189 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 RNASET2O00584 256 aaKnown RBP17.07■□□□□ 0.32
ATG4D-203ENST00000585752 DVL2O14641 736 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 ICOSLGO75144 302 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 NCF2P19878 526 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-203ENST00000585752 IRX1P78414 480 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-203ENST00000585752 EFR3AQ14156 821 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 RCAN2Q14206 197 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 SPANXN4Q5MJ08 99 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 SIMC1Q8NDZ2 872 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 OR56A1Q8NGH5 318 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 OR14L1PQ8NHC6 308 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 NUDT8Q8WV74 236 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 JADE3Q92613 823 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 TMBIM1Q969X1 311 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 MOAP1Q96BY2 351 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 CCDC134Q9H6E4 229 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 Q9N2J8 555 aa17.07■□□□□ 0.32
ATG4D-203ENST00000585752 FAM120CQ9NX05 1096 aaKnown RBP17.07■□□□□ 0.32
ATG4D-203ENST00000585752 MRTO4Q9UKD2 239 aaKnown RBP17.07■□□□□ 0.32
ATG4D-203ENST00000585752 GPR55Q9Y2T6 319 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-203ENST00000585752 PRSS51A0A1B0GVH4 220 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 C2orf72A6NCS6 295 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 PRAMEF25A6NGN4 478 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 OR6C70A6NIJ9 312 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 ANKRD28O15084 1053 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 CBR3O75828 277 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 CPSF4O95639 269 aaKnown RBP17.06■□□□□ 0.32
ATG4D-203ENST00000585752 IL6P05231 212 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 KRT16P08779 473 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 CCT3P49368 545 aaKnown RBP17.06■□□□□ 0.32
ATG4D-203ENST00000585752 PRIM2P49643 509 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 CRYZQ08257 329 aaKnown RBP17.06■□□□□ 0.32
ATG4D-203ENST00000585752 LRRC74AQ0VAA2 488 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 TP53BP2Q13625 1128 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 WIPI1Q5MNZ9 446 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-203ENST00000585752 TMEM81Q6P7N7 255 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 TMEM200AQ86VY9 491 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 LACC1Q8IV20 430 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 DMRTC2Q8IXT2 367 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-203ENST00000585752 RFWD2Q8NHY2 731 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 HGDQ93099 445 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms