RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SENP5Q96HI0 755 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF681Q96N22 645 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RAB11FIP5Q9BXF6 653 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 WDR26Q9H7D7 661 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GIMAP4Q9NUV9 329 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ASB6Q9NWX5 421 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KLHL28Q9NXS3 571 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 LATO43561 262 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRICKLE3O43900 615 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NCR1O76036 304 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZIC2O95409 532 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 THY1P04216 161 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FZD5Q13467 585 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 IL18Q14116 193 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PGGHGQ32M88 737 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF791Q3KP31 576 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 Q5BKY6 102 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 EOGTQ5NDL2 527 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C6orf132Q5T0Z8 1188 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MZT2BQ6NZ67 158 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 VASH1Q7L8A9 365 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C16orf62Q7Z3J2 963 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 UBE2Q1Q7Z7E8 422 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NRMQ8IXM6 262 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GIMAP5Q96F15 307 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RIPOR3Q96MK2 946 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TMEM43Q9BTV4 400 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SARGQ9BW04 601 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 JAM3Q9BX67 310 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NDEL1Q9GZM8 345 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MALT1Q9UDY8 824 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KLHL21Q9UJP4 597 aa13.28□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GOLGA4Q13439 2230 aaKnown RBP13.27□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FCMRO60667 390 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MTRF1O75570 445 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PCDH8O95206 1070 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PRKAR1AP10644 381 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PSKH1P11801 424 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TSFMP43897 325 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GPR4P46093 362 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RGS8P57771 180 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 INSL4Q14641 139 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MZT2AQ6P582 158 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PLEKHM3Q6ZWE6 761 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MBOAT2Q6ZWT7 520 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GDF7Q7Z4P5 450 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LIX1LQ8IVB5 337 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TMEM145Q8NBT3 493 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 BBS1Q8NFJ9 593 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NLGN4YQ8NFZ3 816 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SPRYD4Q8WW59 207 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SECISBP2Q96T21 854 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ACTRT3Q9BYD9 372 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CBLCQ9ULV8 474 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NTNG1Q9Y2I2 539 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TBC1D3BA6NDS4 549 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM25AB3EWG3 89 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM25CB3EWG5 89 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM25GB3EWG6 89 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RFXAPO00287 272 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LYRM1O43325 122 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TRIM3O75382 744 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GALP22466 123 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ABATP80404 500 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 AGBL4Q5VU57 503 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TIGD3Q6B0B8 471 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZNF322Q6U7Q0 402 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PAMR1Q6UXH9 720 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ABI3BPQ7Z7G0 1075 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FBXL6Q8N531 539 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SRFBP1Q8NEF9 429 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR2T33Q8NG76 320 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR2L3Q8NG85 312 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR52E1Q8NGJ3 308 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RNF32Q9H0A6 362 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SYNPO2LQ9H987 977 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KCNK6Q9Y257 313 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MAU2Q9Y6X3 613 aa13.27□□□□□ -0.29
CDK5RAP3-237ENST00000585163 J3QRE1 110 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 AGRPO00253 132 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR5F1O95221 314 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PDX1P52945 283 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RAB8AP61006 207 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ERVK-21P61565 698 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 AGERQ15109 404 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 HEPHL1Q6MZM0 1159 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TMEM91Q6ZNR0 172 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GLCCI1Q86VQ1 547 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TMEM255BQ8WV15 326 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC35A4Q96G79 324 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC41A3Q96GZ6 507 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MCHR1Q99705 422 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NLGN3Q9NZ94 848 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CSNK1G3Q9Y6M4 447 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CDH10Q9Y6N8 788 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms