RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 NOL11Q9H8H0 719 aaKnown RBP2.19□□□□□ -2.06
VAPA-208ENST00000584796 TM9SF3Q9HD45 589 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 KCNMB3Q9NPA1 279 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 DNAJC17Q9NVM6 304 aaKnown RBP2.19□□□□□ -2.06
VAPA-208ENST00000584796 COMMD8Q9NX08 183 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 VPS18Q9P253 973 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 TRPC4Q9UBN4 977 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 EXTL2Q9UBQ6 330 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 FETUBQ9UGM5 382 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 CPSF3Q9UKF6 684 aaKnown RBP2.19□□□□□ -2.06
VAPA-208ENST00000584796 ITGA11Q9UKX5 1188 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 CLEC4EQ9ULY5 219 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 SNX7Q9UNH6 387 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 CELA1Q9UNI1 258 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 AURKCQ9UQB9 309 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 CA5BQ9Y2D0 317 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 ZNF510Q9Y2H8 683 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 KIF3AQ9Y496 699 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 PCDHGA1Q9Y5H4 931 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 CSNK1G3Q9Y6M4 447 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 U3KQA8 63 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 CSPG4Q6UVK1 2322 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 TGP01266 2768 aa2.19□□□□□ -2.06
VAPA-208ENST00000584796 MYO7BQ6PIF6 2116 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 CNTRLQ7Z7A1 2325 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 FER1L5A0AVI2 2057 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 LOC105371242A0A075B767 164 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 KLF18A0A0U1RQI7 1052 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 MEI4A8MW99 385 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 C10orf142B7Z368 130 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 K7ENP7 123 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 FLRT2O43155 660 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 RRP8O43159 456 aaKnown RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 AP5Z1O43299 807 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 VEGFDO43915 354 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 FAM189A1O60320 539 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 CREG1O75629 220 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 PALMO75781 387 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 CDK2AP2O75956 126 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 REC8O95072 547 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 BCL10O95999 233 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 IGHV4-34P06331 123 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 LINGO3P0C6S8 592 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 CISD3P0C7P0 127 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 FAM58BPP0C7Q3 252 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 FERP16591 822 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 EEF1B2P24534 225 aaKnown RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 HLA-FP30511 346 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 AXLP30530 894 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 ACAA2P42765 397 aaKnown RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 NUMBP49757 651 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 TPMTP51580 245 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 PTPRCAPQ14761 206 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 EFTUD2Q15029 972 aaKnown RBP eCLIP2.18□□□□□ -2.06
VAPA-208ENST00000584796 PDK1Q15118 436 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 PDGFRLQ15198 375 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 TRADDQ15628 312 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 ZBTB6Q15916 424 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 TAZQ16635 292 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 PRR30Q53SZ7 412 aaPredicted RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 SPDYCQ5MJ68 293 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 WSCD1Q658N2 575 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 TMEM215Q68D42 235 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 TMEM211Q6ICI0 200 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 ABI3BPQ7Z7G0 1075 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 ZER1Q7Z7L7 766 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 TMEM110Q86TL2 294 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 COMMD2Q86X83 199 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 BBS7Q8IWZ6 715 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 ZC3H3Q8IXZ2 948 aaKnown RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 C4orf19Q8IY42 314 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 Q8N7P7 452 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 LEMD2Q8NC56 503 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 NPEPL1Q8NDH3 523 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 C11orf45Q8TAV5 145 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 SAP25Q8TEE9 199 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 CHPT1Q8WUD6 406 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 PDCD6IPQ8WUM4 868 aaKnown RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 BCL2L2Q92843 193 aaPredicted RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 EXT2Q93063 718 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 TOMM40LQ969M1 308 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 SPACA9Q96E40 222 aaPredicted RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 SENP8Q96LD8 212 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 KCNK16Q96T55 309 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 LZTS2Q9BRK4 669 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 LMF2Q9BU23 707 aaKnown RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 ZNF350Q9GZX5 532 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 KCNK15Q9H427 330 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 GOLPH3LQ9H4A5 285 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 POLE3Q9NRF9 147 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 SPHK1Q9NYA1 384 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 CGNQ9P2M7 1197 aaKnown RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 CTSZQ9UBR2 303 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 EXOC7Q9UPT5 735 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 SATB2Q9UPW6 733 aa2.18□□□□□ -2.06
VAPA-208ENST00000584796 RPH3AQ9Y2J0 694 aaPredicted RBP2.18□□□□□ -2.06
VAPA-208ENST00000584796 DOCK10Q96BY6 2186 aa2.17□□□□□ -2.06
VAPA-208ENST00000584796 POLEQ07864 2286 aa2.17□□□□□ -2.06
VAPA-208ENST00000584796 SPTBP11277 2137 aa2.17□□□□□ -2.06
VAPA-208ENST00000584796 A0A1B0GTQ1 180 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms