RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 EEF1E1-BLOC1S5C9J1V9 151 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 SYT5O00445 386 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 POLR3GO15318 223 aaPredicted RBP14.26□□□□□ -0.13
SKA2-209ENST00000583976 PDPK1O15530 556 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 EEF1E1O43324 174 aaKnown RBP14.26□□□□□ -0.13
SKA2-209ENST00000583976 TGDSO95455 350 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 LAMP1P11279 417 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 PRPS1L1P21108 318 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 CLDN8P56748 225 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 MRPS35P82673 323 aaKnown RBP14.26□□□□□ -0.13
SKA2-209ENST00000583976 MGAT2Q10469 447 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 PDE7AQ13946 482 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 EXOSC7Q15024 291 aaKnown RBP14.26□□□□□ -0.13
SKA2-209ENST00000583976 PGS1Q32NB8 556 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 FBXL19-AS1Q494R0 122 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 WIPI1Q5MNZ9 446 aaPredicted RBP14.26□□□□□ -0.13
SKA2-209ENST00000583976 TBCELQ5QJ74 424 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 FAM9CQ8IZT9 166 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 VWA5B2Q8N398 1253 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 ZNF615Q8N8J6 731 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 C9orf106Q8NAJ2 232 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 SIMC1Q8NDZ2 872 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 CHDHQ8NE62 594 aaPredicted RBP14.26□□□□□ -0.13
SKA2-209ENST00000583976 ADIPOR1Q96A54 375 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 MTERF3Q96E29 417 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 TRIB1Q96RU8 372 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 UGT2B28Q9BY64 529 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 TCF7L2Q9NQB0 619 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 AIG1Q9NVV5 245 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 BCAP29Q9UHQ4 241 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 NPFFR2Q9Y5X5 522 aa14.26□□□□□ -0.13
SKA2-209ENST00000583976 ANKRD33BA6NCL7 494 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 E9PBE3 544 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 UBDO15205 165 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 TBX19O60806 448 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 EPPINO95925 133 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 HPNP05981 417 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 PCSK2P16519 638 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 GPX3P22352 226 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 DNASE1P24855 282 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 ABCD3P28288 659 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 RPL3P39023 403 aaKnown RBP14.25□□□□□ -0.13
SKA2-209ENST00000583976 UFM1P61960 85 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 MAP4K2Q12851 820 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 HSPB3Q12988 150 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 POU4F3Q15319 338 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 TOMM20Q15388 145 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 ZNF628Q5EBL2 1059 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 CPTPQ5TA50 214 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 NSUN5P2Q63ZY6 315 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 ZNF551Q7Z340 670 aaPredicted RBP14.25□□□□□ -0.13
SKA2-209ENST00000583976 YRDCQ86U90 279 aaKnown RBP14.25□□□□□ -0.13
SKA2-209ENST00000583976 RIMKLAQ8IXN7 391 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 LINC01560Q8TB33 94 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 FAM222BQ8WU58 562 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 HSPBAP1Q96EW2 488 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 AMDHD1Q96NU7 426 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 PRPF18Q99633 342 aaKnown RBP14.25□□□□□ -0.13
SKA2-209ENST00000583976 ITPAQ9BY32 194 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 ANGPTL4Q9BY76 406 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 NXF5Q9H1B4 397 aaKnown RBP14.25□□□□□ -0.13
SKA2-209ENST00000583976 OR10A5Q9H207 317 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 CCDC134Q9H6E4 229 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 GALNT9Q9HCQ5 603 aa14.25□□□□□ -0.13
SKA2-209ENST00000583976 MPDZO75970 2070 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 A0A0G2JND7 137 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 C9JVG2 144 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 TP53I11O14683 189 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 NME6O75414 186 aaPredicted RBP14.24□□□□□ -0.13
SKA2-209ENST00000583976 BMP7P18075 431 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 S1PR1P21453 382 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 PTPN6P29350 595 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 GPC1P35052 558 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 TIMP3P35625 211 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 CASP3P42574 277 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 DGKQP52824 942 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 MANFP55145 182 aaKnown RBP14.24□□□□□ -0.13
SKA2-209ENST00000583976 FUT7Q11130 342 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 HLA-DQA1Q5Y7H0 255 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 VASNQ6EMK4 673 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 TMEM107Q6UX40 140 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 ANGPTL8Q6UXH0 198 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 WFDC11Q8NEX6 87 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 OR52R1Q8NGF1 315 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 GOT1L1Q8NHS2 421 aaPredicted RBP14.24□□□□□ -0.13
SKA2-209ENST00000583976 WDYHV1Q96HA8 205 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 TEX37Q96LM6 180 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 ALPK1Q96QP1 1244 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 GPR45Q9Y5Y3 372 aa14.24□□□□□ -0.13
SKA2-209ENST00000583976 A0A1W2PPR1 153 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 A0A1W2PRB8 838 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 C2orf72A6NCS6 295 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 MBD3L4A6NDZ8 208 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 MBD3L3A6NE82 208 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 MBD3L5A6NJ08 208 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 AHRRA9YTQ3 701 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 ANKRD28O15084 1053 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 ATE1O95260 518 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 CBX7O95931 251 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 IL2RAP01589 272 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms