RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 MORN4Q8NDC4 146 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 TMEM80Q96HE8 168 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 C10orf90Q96M02 699 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 NEDD4LQ96PU5 975 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 CCDC3Q9BQI4 270 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 FUZQ9BT04 418 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 DAPP1Q9UN19 280 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 SYNDIG1LA6NDD5 238 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 CCRL2O00421 344 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 MYL12BO14950 172 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 CH25HO95992 272 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 TNFP01375 233 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 ZNF10P21506 573 aaPredicted RBP12.78□□□□□ -0.36
SRSF1-205ENST00000582730 TRHRP34981 398 aaPredicted RBP12.78□□□□□ -0.36
SRSF1-205ENST00000582730 LTBRP36941 435 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 SLC15A1P46059 708 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 GIPRP48546 466 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 ARFIP1P53367 373 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 PPP1CAP62136 330 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 SHC2P98077 582 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 DEFB110Q30KQ9 67 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 TRMT12Q53H54 448 aaKnown RBP12.78□□□□□ -0.36
SRSF1-205ENST00000582730 PAQR6Q6TCH4 344 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 FLVCR1-AS1Q8TAF5 88 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 NT5CQ8TCD5 201 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 CLIP3Q96DZ5 547 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 GIMAP5Q96F15 307 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 TRNT1Q96Q11 434 aaKnown RBP12.78□□□□□ -0.36
SRSF1-205ENST00000582730 PCOLCE2Q9UKZ9 415 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 FANCMQ8IYD8 2048 aa12.78□□□□□ -0.36
SRSF1-205ENST00000582730 A6NCN8 305 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 CTDSP2O14595 271 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 CTSEP14091 401 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 DOC2BQ14184 412 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 NDUFA9Q16795 377 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 PRICKLE2Q7Z3G6 844 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 MCHR1Q99705 422 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 TTYH2Q9BSA4 534 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 SLC25A19Q9HC21 320 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 PAQR5Q9NXK6 330 aaPredicted RBP12.77□□□□□ -0.36
SRSF1-205ENST00000582730 KCMF1Q9P0J7 381 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 IL20RAQ9UHF4 553 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 TBC1D24Q9ULP9 559 aa12.77□□□□□ -0.36
SRSF1-205ENST00000582730 DUXAA6NLW8 204 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 C2orf74A8MZ97 194 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 TNFRSF10CO14798 259 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 KIAA0513O60268 411 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
SRSF1-205ENST00000582730 TP53P04637 393 aaPredicted RBP12.77□□□□□ -0.37
SRSF1-205ENST00000582730 CSTF2P33240 577 aaKnown RBP eCLIP12.77□□□□□ -0.372e-13■■■■■ 79.7
SRSF1-205ENST00000582730 LSSP48449 732 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.37
SRSF1-205ENST00000582730 ST3GAL3Q11203 375 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 COX10Q12887 443 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 TRAM2Q15035 370 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 DUSP5Q16690 384 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 ENTPD8Q5MY95 495 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 CCDC190Q86UF4 302 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 SLC22A18ASQ8N1D0 253 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 CYP4Z2PQ8N1L4 340 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 SLC37A2Q8TED4 501 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 SLC6A18Q96N87 628 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 RBCK1Q9BYM8 510 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 EVA1BQ9NVM1 165 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 NPIPA5A0A0B4J1W7 369 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 NPIPA7E9PJI5 369 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 LOC110117498-PIK3R3F6TDL0 507 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 CSO75390 466 aaKnown RBP12.77□□□□□ -0.37
SRSF1-205ENST00000582730 NPIPA8P0DM63 369 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 IFNGR2P38484 337 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 GPR4P46093 362 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 SMSP52788 366 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 GALK2Q01415 458 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 GPR50Q13585 617 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 C1orf94Q6P1W5 598 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 Q6ZS52 159 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 NKAIN4Q8IVV8 208 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 OTULINQ96BN8 352 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 ARSGQ96EG1 525 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 CNPPD1Q9BV87 410 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 POLR2J2Q9GZM3 115 aaKnown RBP12.77□□□□□ -0.37
SRSF1-205ENST00000582730 MAU2Q9Y6X3 613 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 SPACA6W5XKT8 324 aa12.77□□□□□ -0.37
SRSF1-205ENST00000582730 SLITRK5O94991 958 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 CPMP14384 443 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 DDOSTP39656 456 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 GNG2P59768 71 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 SPHARQ15513 63 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
SRSF1-205ENST00000582730 FRRS1Q6ZNA5 592 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 ZNF438Q7Z4V0 828 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 KIF18BQ86Y91 864 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 PEX5LQ8IYB4 626 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 LINC00471Q8N535 108 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 PIK3R3Q92569 461 aa12.76□□□□□ -0.37
SRSF1-205ENST00000582730 KCNS3Q9BQ31 491 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms