RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PKP2Q99959 881 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 NUDT9Q9BW91 350 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 GLIPR2Q9H4G4 154 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 PIF1Q9H611 641 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 DDX18Q9NVP1 670 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 ADPRHL2Q9NX46 363 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 PRODH2Q9UF12 536 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 RAB26Q9ULW5 256 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 RNF103-CHMP3A0A140T963 221 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 CT62P0C5K7 136 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 SSTR4P31391 388 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 CRATP43155 626 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 SLC37A1P57057 533 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 RNF4P78317 190 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 MGAT2Q10469 447 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 HSPB3Q12988 150 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 MED21Q13503 144 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 RGNQ15493 299 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 ATP6AP1Q15904 470 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 PRSS53Q2L4Q9 553 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 ACER2Q5QJU3 275 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 FHL5Q5TD97 284 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 HLA-DQA1Q5Y7H0 255 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 LPCAT4Q643R3 524 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 FAM111BQ6SJ93 734 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 RPS19BP1Q86WX3 136 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 METTL25Q8N6Q8 603 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 SFXN5Q8TD22 340 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 SSC4DQ8WTU2 575 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 LRTOMTQ8WZ04 291 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 AURKBQ96GD4 344 aaPredicted RBP12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 TRIM8Q9BZR9 551 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 OR10A5Q9H207 317 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 C3orf14Q9HBI5 128 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 SLAMF7Q9NQ25 335 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 AGPAT4Q9NRZ5 378 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF639Q9UID6 485 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF223Q9UK11 482 aaPredicted RBP12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 CSMD2Q7Z408 3487 aa12.47□□□□□ -0.41
CSNK1D-220ENST00000581737 CENPEQ02224 2701 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ENO4A6NNW6 628 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 HRKO00198 91 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 GNGT2O14610 69 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 DPM1O60762 260 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 TIPRLO75663 272 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 PDE9AO76083 593 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 MC3RP41968 323 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ARHGDIAP52565 204 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 DCAF7P61962 342 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 HBA1P69905 142 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 PSPHP78330 225 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 MRPS35P82673 323 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 PRR5P85299 388 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 EBPQ15125 230 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 MPEG1Q2M385 716 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 NADK2Q4G0N4 442 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 PRR30Q53SZ7 412 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 TMEM107Q6UX40 140 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 TMEM64Q6YI46 380 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 LINC00696Q6ZRV3 163 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF551Q7Z340 670 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ZZZ3Q8IYH5 903 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 SVOPLQ8N434 492 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ZADH2Q8N4Q0 377 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF321PQ8N8H1 164 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF615Q8N8J6 731 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 OR52R1Q8NGF1 315 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 OR56A1Q8NGH5 318 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 SLC22A8Q8TCC7 542 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 CPT1CQ8TCG5 803 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 KAT2AQ92830 837 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 ELP4Q96EB1 424 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 NR1H4Q96RI1 486 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 GAL3ST4Q96RP7 486 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 SEPHS2Q99611 448 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 OSBPL10Q9BXB5 764 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 WWTR1Q9GZV5 400 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 IKZF5Q9H5V7 419 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 TMEM38AQ9H6F2 299 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 MYOTQ9UBF9 498 aa12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 C19orf53Q9UNZ5 99 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 YARS2Q9Y2Z4 477 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-220ENST00000581737 PRRC2CQ9Y520 2896 aaKnown RBP12.46□□□□□ -0.42
CSNK1D-220ENST00000581737 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 ANKRD17O75179 2603 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 C2orf92A0A1B0GVN3 265 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 TTC36A6NLP5 189 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 TTLL8A6PVC2 850 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 CLDN1O95832 211 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 CBX7O95931 251 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 SERPINA1P01009 418 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 UQCRBP14927 111 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 S1PR1P21453 382 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 PTGER1P34995 402 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 KHKP50053 298 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms