RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SRP54P61011 504 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 PLOD1Q02809 727 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 ZP4Q12836 540 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 ELAVL3Q14576 367 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 UBE2V2Q15819 145 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 PARP6Q2NL67 630 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 IRGCQ6NXR0 463 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 P4HA3Q7Z4N8 544 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 UNC45BQ8IWX7 931 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 CCDC36Q8IYA8 594 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 PEX5LQ8IYB4 626 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 TMEM185AQ8NFB2 350 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 ART4Q93070 314 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 IL22RA2Q969J5 263 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 NEIL2Q969S2 332 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 SNX21Q969T3 373 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 HAVCR1Q96D42 359 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 VPS39Q96JC1 886 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 NAP1L3Q99457 506 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 TEX13AQ9BXU3 409 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 NACA2Q9H009 215 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 DDX47Q9H0S4 455 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 SIRPDQ9H106 197 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 GLIPR2Q9H4G4 154 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 NANOGQ9H9S0 305 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 GHRLQ9UBU3 117 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 TEX264Q9Y6I9 313 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 SAGE2PA6NJ88 616 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ABCD4O14678 606 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 PPIHO43447 177 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 RAMP1O60894 148 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 TBL1XO60907 577 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 SCRG1O75711 98 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 TIMP1P01033 207 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 JCHAINP01591 159 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 SEMG1P04279 462 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 CD55P08174 381 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 SLC35G4P0C7Q5 338 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 VDRP11473 427 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 VDAC1P21796 283 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 CDH5P33151 784 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 SLC6A8P48029 635 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 HERVK_113P63132 956 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ERVK-8P63133 956 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 OTUD4Q01804 1114 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 OC90Q02509 493 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 TLE4Q04727 773 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 PKN2Q16513 984 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ZNF630Q2M218 657 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 LRIT3Q3SXY7 679 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 AGBL2Q5U5Z8 902 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 SULT1C3Q6IMI6 304 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 LEG1Q6P5S2 330 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 BTNL3Q6UXE8 466 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ZNF562Q6V9R5 426 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ANKRD23Q86SG2 305 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 CNTN4Q8IWV2 1026 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ZNF100Q8IYN0 542 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ARFGAP2Q8N6H7 521 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ANKRD49Q8WVL7 239 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 DCUN1D4Q92564 292 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 TMEM80Q96HE8 168 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 COQ7Q99807 217 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 CTRCQ99895 268 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ERVK-6Q9BXR3 956 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 SLC25A39Q9BZJ4 359 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 PRMT8Q9NR22 394 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 HOMER3Q9NSC5 361 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 ONECUT1Q9UBC0 465 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 TDRKHQ9Y2W6 561 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 PPIAL4AQ9Y536 164 aa2.01□□□□□ -2.09
SMCHD1-206ENST00000581631 FBLL1A6NHQ2 334 aaKnown RBP2□□□□□ -2.09
SMCHD1-206ENST00000581631 TM9SF1O15321 606 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 VEGFDO43915 354 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 KINO60870 393 aaKnown RBP2□□□□□ -2.09
SMCHD1-206ENST00000581631 STSP08842 583 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 OR8U8P0C7N1 319 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 ZCCHC18P0CG32 403 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 CCNA2P20248 432 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 LIM2P55344 173 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 KRT83P78385 493 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 MRPS6P82932 125 aaKnown RBP2□□□□□ -2.09
SMCHD1-206ENST00000581631 LRRC63Q05C16 580 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 EGFEM1PQ0D2K5 195 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 RPA4Q13156 261 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 KARSQ15046 597 aaKnown RBP2□□□□□ -2.09
SMCHD1-206ENST00000581631 ZSWIM7Q19AV6 140 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 TEX44Q53QW1 395 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 TFDP3Q5H9I0 405 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 METTL11BQ5VVY1 283 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 SLC39A4Q6P5W5 647 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 ADAMTSL2Q86TH1 951 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 ZNF589Q86UQ0 364 aaPredicted RBP2□□□□□ -2.09
SMCHD1-206ENST00000581631 PPP1R27Q86WC6 154 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 BPIFB2Q8N4F0 458 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 ALLCQ8N6M5 410 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 DCAF4L2Q8NA75 395 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 FBXO30Q8TB52 745 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 KRT35Q92764 455 aa2□□□□□ -2.09
SMCHD1-206ENST00000581631 MCHR2Q969V1 340 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms