RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 HOXD1Q9GZZ0 328 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 QRSL1Q9H0R6 528 aaKnown RBP10.21□□□□□ -0.77
SKA2-206ENST00000581068 NXF5Q9H1B4 397 aaKnown RBP10.21□□□□□ -0.77
SKA2-206ENST00000581068 ARMC7Q9H6L4 198 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 EVA1AQ9H8M9 152 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 DLL3Q9NYJ7 618 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 ABCG2Q9UNQ0 655 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 ZNF443Q9Y2A4 671 aaPredicted RBP10.21□□□□□ -0.77
SKA2-206ENST00000581068 SLC9A8Q9Y2E8 581 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 FAM32AQ9Y421 112 aaKnown RBP10.21□□□□□ -0.77
SKA2-206ENST00000581068 DTNAQ9Y4J8 743 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 PCDHGA10Q9Y5H3 936 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 HS3ST3B1Q9Y662 390 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 ENPP4Q9Y6X5 453 aa10.21□□□□□ -0.77
SKA2-206ENST00000581068 MYO15AQ9UKN7 3530 aa10.21□□□□□ -0.78
SKA2-206ENST00000581068 MUC6Q6W4X9 2439 aa10.21□□□□□ -0.78
SKA2-206ENST00000581068 IGHV1-45A0A0A0MS14 117 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 TRBV11-1A0A0K0K1C0 115 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 A0A1W2PQ72 361 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 PRAMEF25A6NGN4 478 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 SAC3D1A6NKF1 404 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 SOCS6O14544 535 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 SNPHO15079 494 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 ZFAND5O76080 213 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 SDHBP21912 280 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 PEX2P28328 305 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 KRT20P35900 424 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 DLSTP36957 453 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 OR1E2P47887 323 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 NR0B1P51843 470 aaKnown RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 ATP12AP54707 1039 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 PUM1Q14671 1186 aaKnown RBP eCLIP10.2□□□□□ -0.78
SKA2-206ENST00000581068 ZNF141Q15928 474 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 EXT1Q16394 746 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 NNATQ16517 81 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 ZSWIM7Q19AV6 140 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 LRRC36Q1X8D7 754 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 IQCCQ4KMZ1 466 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 FAM69BQ5VUD6 431 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 IGF2-ASQ6U949 168 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 NDUFAF7Q7L592 441 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 HMGN2P46Q86SG4 172 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 ZAR1Q86SH2 424 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 CYP4Z1Q86W10 505 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 SLC34A3Q8N130 599 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 NUBPLQ8TB37 319 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 M1APQ8TC57 530 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 APOBEC4Q8WW27 367 aaKnown RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 OIT3Q8WWZ8 545 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 TMBIM1Q969X1 311 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 NACC2Q96BF6 587 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 IMMP1LQ96LU5 166 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 ARHGDIGQ99819 225 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 TACO1Q9BSH4 297 aaKnown RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 C9orf16Q9BUW7 83 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 RSPO3Q9BXY4 272 aaPredicted RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 AMBRA1Q9C0C7 1298 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 VCXQ9H320 206 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 NTN4Q9HB63 628 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 C8orf4Q9NR00 106 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 NDUFAF4Q9P032 175 aa10.2□□□□□ -0.78
SKA2-206ENST00000581068 ZNF223Q9UK11 482 aaPredicted RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 CNOT11Q9UKZ1 510 aaKnown RBP10.2□□□□□ -0.78
SKA2-206ENST00000581068 DNAH14Q0VDD8 3507 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 NSG1A0A0A6YYJ2 146 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 NPIPA5A0A0B4J1W7 369 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 LOC101059948A0A1B0GTJ6 334 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 CDRT15L2A8MXV6 281 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 NPIPA7E9PJI5 369 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 PEX12O00623 359 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 TERTO14746 1132 aaKnown RBP10.19□□□□□ -0.78
SKA2-206ENST00000581068 PRKNO60260 465 aaPredicted RBP10.19□□□□□ -0.78
SKA2-206ENST00000581068 E2F6O75461 281 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 REM1O75628 298 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 UGT2B17O75795 530 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 DNAJB5O75953 348 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 DIRAS1O95057 198 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 NPIPA8P0DM63 369 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 COX6A1P12074 109 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 NID1P14543 1247 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 RHCEP18577 417 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 OTX2P32243 289 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 DCTP40126 519 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 NRG3P56975 720 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 RPS18P62269 152 aaKnown RBP10.19□□□□□ -0.78
SKA2-206ENST00000581068 EEF1A1P68104 462 aaKnown RBP10.19□□□□□ -0.78
SKA2-206ENST00000581068 MAPK14Q16539 360 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 NRF1Q16656 503 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 RSPO4Q2I0M5 234 aaPredicted RBP10.19□□□□□ -0.78
SKA2-206ENST00000581068 BTBD16Q32M84 506 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 RNF220Q5VTB9 566 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 KIRREL2Q6UWL6 708 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 ZNF836Q6ZNA1 936 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 ZBTB49Q6ZSB9 765 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 PPP1R32Q7Z5V6 425 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 TSEN54Q7Z6J9 526 aaKnown RBP10.19□□□□□ -0.78
SKA2-206ENST00000581068 TAGAPQ8N103 731 aa10.19□□□□□ -0.78
SKA2-206ENST00000581068 SVOPLQ8N434 492 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms