RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 TP63Q9H3D4 680 aaPredicted RBP17.01■□□□□ 0.31
PPP4R1-215ENST00000580182 GPATCH2Q9NW75 528 aa17.01■□□□□ 0.31
PPP4R1-215ENST00000580182 ZNF446Q9NWS9 450 aa17.01■□□□□ 0.31
PPP4R1-215ENST00000580182 USH1CQ9Y6N9 552 aa17.01■□□□□ 0.31
PPP4R1-215ENST00000580182 C15orf38-AP3S2A0A0A6YYH1 394 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 RNASET2O00584 256 aaKnown RBP17■□□□□ 0.31
PPP4R1-215ENST00000580182 CBR3O75828 277 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 KCNK2O95069 426 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 UTS2O95399 124 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 KIR3DL1P43629 444 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 PRIM2P49643 509 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 DGKQP52824 942 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 GRAMD1BQ3KR37 738 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 FAM174BQ3ZCQ3 159 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 CCNJQ5T5M9 372 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 ZCCHC12Q6PEW1 402 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 APOOLQ6UXV4 268 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 MARCH3Q86UD3 253 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 PLCZ1Q86YW0 608 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 OR56A1Q8NGH5 318 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 OR4A15Q8NGL6 344 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 FAM110BQ8TC76 370 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 SFXN5Q8TD22 340 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 DYDC1Q8WWB3 177 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 CHMP6Q96FZ7 201 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 NEUROD4Q9HD90 331 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 INTS9Q9NV88 658 aaKnown RBP17■□□□□ 0.31
PPP4R1-215ENST00000580182 ALKBH4Q9NXW9 302 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 MRTO4Q9UKD2 239 aaKnown RBP17■□□□□ 0.31
PPP4R1-215ENST00000580182 KCNE3Q9Y6H6 103 aa17■□□□□ 0.31
PPP4R1-215ENST00000580182 NCOA6Q14686 2063 aaPredicted RBP17■□□□□ 0.31
PPP4R1-215ENST00000580182 NBPF19A0A087WUL8 3843 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 DIAPH2O60879 1101 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 CPSF4O95639 269 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 CLNS1AP54105 237 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 PSMD4P55036 377 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 CRYZQ08257 329 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 STX5Q13190 355 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 WLSQ5T9L3 541 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 RTL6Q6ICC9 239 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 CDC73Q6P1J9 531 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 ZNF808Q8N4W9 903 aaPredicted RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 COX18Q8N8Q8 333 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 ACTRT2Q8TDY3 377 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 PHF10Q8WUB8 498 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 ACTRT3Q9BYD9 372 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 SERHL2Q9H4I8 314 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 FAM120CQ9NX05 1096 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 FAM215AQ9Y5M1 114 aa16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 SPTBN1Q01082 2364 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-215ENST00000580182 PRSS51A0A1B0GVH4 220 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 E9PBE3 544 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 BMP7P18075 431 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 TCEA1P23193 301 aaKnown RBP16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 S100A3P33764 101 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 CASP9P55211 416 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 RPS26P62854 115 aaKnown RBP16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 POU6F2P78424 691 aaPredicted RBP16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 DCST1Q5T197 706 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 EPGNQ6UW88 154 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 RPTNQ6XPR3 784 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 OR5D16Q8NGK9 328 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 OR4C3Q8NH37 302 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 CKAP2Q8WWK9 683 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 STACQ99469 402 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 TIMP4Q99727 224 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 DSN1Q9H410 356 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 PIGUQ9H490 435 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 DUSP22Q9NRW4 184 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 MED11Q9P086 117 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 PPP4R1LQ9P1A2 415 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 FAF1Q9UNN5 650 aaPredicted RBP16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 ABCG2Q9UNQ0 655 aa16.98■□□□□ 0.31
PPP4R1-215ENST00000580182 RNF103-CHMP3A0A140T963 221 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 C1QCP02747 245 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 ACVR2AP27037 513 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 SMSP52788 366 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 NUP107P57740 925 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 PMPCAQ10713 525 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 ANXA8L1Q5VT79 327 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 VASNQ6EMK4 673 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 C6orf120Q7Z4R8 191 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 EID3Q8N140 333 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 OR2M3Q8NG83 312 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 OR14L1PQ8NHC6 308 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 ADAMTS15Q8TE58 950 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 DUSP19Q8WTR2 217 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 MOAP1Q96BY2 351 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 OR7D2Q96RA2 312 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 EBF4Q9BQW3 602 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 BTBD2Q9BX70 525 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 UGT2B28Q9BY64 529 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 OR2B2Q9GZK3 357 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 GIN1Q9NXP7 522 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 PCDHGB4Q9UN71 923 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 PCNX1Q96RV3 2341 aa16.97■□□□□ 0.31
PPP4R1-215ENST00000580182 FIGNL2A6NMB9 653 aa16.96■□□□□ 0.31
PPP4R1-215ENST00000580182 KDM4EB2RXH2 506 aaPredicted RBP16.96■□□□□ 0.31
PPP4R1-215ENST00000580182 UBDO15205 165 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms