RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 EFR3AQ14156 821 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 DCST2Q5T1A1 773 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 ZCCHC12Q6PEW1 402 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 HMGN2P46Q86SG4 172 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 FAM110BQ8TC76 370 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 GTF2H4Q92759 462 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 NEURL3Q96EH8 262 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 SECISBP2Q96T21 854 aaKnown RBP19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 STACQ99469 402 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 KLHDC3Q9BQ90 382 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 BTBD2Q9BX70 525 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 PAIP1Q9H074 479 aaKnown RBP19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 ZFP64Q9NPA5 681 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 DUSP22Q9NRW4 184 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 KLHL14Q9P2G3 628 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 SH3BGRL2Q9UJC5 107 aa19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 BOKQ9UMX3 212 aaPredicted RBP19.83■□□□□ 0.77
CDC42EP4-203ENST00000578516 CENPVL1A0A0U1RR11 272 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 PRAMEF27A3QJZ7 478 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 ANKRD33BA6NCL7 494 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 SNPHO15079 494 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 GMFGO60234 142 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 FADS1O60427 444 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 ABCB7O75027 752 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 DRD4P21917 467 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 TRPC1P48995 793 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 MARCH3Q86UD3 253 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 MSRB3Q8IXL7 192 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 OR4C3Q8NH37 302 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 PRR7Q8TB68 274 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 ZFP90Q8TF47 636 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 TMCO6Q96DC7 493 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 ITCHQ96J02 903 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 FBXL2Q9UKC9 423 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 OSGIN2Q9Y236 505 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 WIF1Q9Y5W5 379 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 RELNP78509 3460 aa19.82■□□□□ 0.76
CDC42EP4-203ENST00000578516 A0A1B0GTH9 108 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 TTC36A6NLP5 189 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 ACOT7O00154 380 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 GDF1P27539 372 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 RPP38P78345 283 aaKnown RBP19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 SRSF1Q07955 248 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 TBCELQ5QJ74 424 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 TMEM81Q6P7N7 255 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 RETREG3Q86VR2 466 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 SLC22A16Q86VW1 577 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 LSRQ86X29 649 aaPredicted RBP19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 FAM109AQ8N4B1 249 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 WDSUB1Q8N9V3 476 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 TMEM41AQ96HV5 264 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 ELAC2Q9BQ52 826 aaKnown RBP19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 TRIM8Q9BZR9 551 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 ZDHHC11Q9H8X9 412 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 SLC25A37Q9NYZ2 338 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 TRIM33Q9UPN9 1127 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 C15orf41Q9Y2V0 281 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 POLEQ07864 2286 aa19.81■□□□□ 0.76
CDC42EP4-203ENST00000578516 ANP32DO95626 131 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 OXSR1O95747 527 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 ENDOUP21128 410 aaKnown RBP19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 KHKP50053 298 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 MVDP53602 400 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 TIGD3Q6B0B8 471 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 SLC30A6Q6NXT4 461 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 MSANTD1Q6ZTZ1 278 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 C10orf111Q8N326 155 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 ARSGQ96EG1 525 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 NMUR2Q9GZQ4 415 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 RMND5AQ9H871 391 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 SAR1AQ9NR31 198 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 ARMCX1Q9P291 453 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 SPRR3Q9UBC9 169 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 PCDHB14Q9Y5E9 798 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 HEATR5AQ86XA9 2040 aa19.8■□□□□ 0.76
CDC42EP4-203ENST00000578516 KIAA1549Q9HCM3 1950 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 HMGN4O00479 90 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 OIP5O43482 229 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 SNX4O95219 450 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 KRT16P08779 473 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 RNF224P0DH78 156 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 ETFAP13804 333 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 CD226Q15762 336 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 HYAL4Q2M3T9 481 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 NDUFAF6Q330K2 333 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 EIPR1Q53HC9 387 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 C1QL3Q5VWW1 255 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 BHLHB9Q6PI77 547 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 NCCRP1Q6ZVX7 275 aaPredicted RBP19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 PACS2Q86VP3 889 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 ANKFN1Q8N957 763 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 OR1J4Q8NGS1 313 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 MIPOL1Q8TD10 442 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 XAGE5Q8WWM1 108 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 SDF2Q99470 211 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 UBQLN3Q9H347 655 aa19.79■□□□□ 0.76
CDC42EP4-203ENST00000578516 MYO7BQ6PIF6 2116 aa19.78■□□□□ 0.76
CDC42EP4-203ENST00000578516 SEMA7AO75326 666 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms