RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ZFP82Q8N141 532 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF433Q8N7K0 673 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 OR4C15Q8NGM1 316 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 NANPQ8TBE9 248 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 BTBD1Q9H0C5 482 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 MAGEH1Q9H213 219 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 LSM2Q9Y333 95 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ANXA2P2A6NMY6 339 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SMAD9O15198 467 aaKnown RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 SMAD6O43541 496 aaKnown RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 HRO43593 1189 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 FMO6PO60774 539 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PEX14O75381 377 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ATG12O94817 140 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 CLDN7O95471 211 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 TGM6O95932 706 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 EIF4EP06730 217 aaKnown RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 SHC1P29353 583 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PBLDP30039 288 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 RPS13P62277 151 aaKnown RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 HSPB3Q12988 150 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 GK2Q14410 553 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 FAM209BQ5JX69 171 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SLC27A4Q6P1M0 643 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 CNKSR3Q6P9H4 555 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM17Q86X19 198 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 STPG2Q8N412 459 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 RELL2Q8NC24 303 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 OR5M3Q8NGP4 307 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ZDHHC1Q8WTX9 485 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF285Q96NJ3 590 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SLC38A3Q99624 504 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 MED18Q9BUE0 208 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 HECAQ9UBI9 543 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 FCF1Q9Y324 198 aaKnown RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 GIMAP1-GIMAP5A0A087WTJ2 511 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 RAB19A4D1S5 217 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 CREBL2O60519 120 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 FZD7O75084 574 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 MTX2O75431 263 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 KLHL18O94889 574 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SOD1P00441 154 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 CLTBP09497 229 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 CSF2RAP15509 400 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 HK1P19367 917 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 POU3F2P20265 443 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 IFNGR2P38484 337 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 TAS2R41P59536 307 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PLD1Q13393 1074 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 NFATC2Q13469 925 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 NDUFAF6Q330K2 333 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PDSS1Q5T2R2 415 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ADGRF1Q5T601 910 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 IER5LQ5T953 404 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 TXNDC8Q6A555 127 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 LILRA6Q6PI73 481 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PRSS45Q7RTY3 260 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 APCDD1Q8J025 514 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PLD4Q96BZ4 506 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 GIMAP5Q96F15 307 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SCMH1Q96GD3 660 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 GHITMQ9H3K2 345 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 WDR26Q9H7D7 661 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 BRD9Q9H8M2 597 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 HEXA-AS1Q9H8Q6 139 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 DENND4AQ7Z401 1863 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 MEIKINA0A087WXM9 373 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 DAPL1A0PJW8 107 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PTP4A3O75365 173 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 MOSPD3O75425 235 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ECDO95905 644 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 PCSK2P16519 638 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ACVR1BP36896 505 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SLC1A3P43003 542 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SELENOPP49908 381 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 WNT3P56703 355 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 DGCR2P98153 550 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 FGL1Q08830 312 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 RAB40BQ12829 278 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ELAVL2Q12926 359 aaKnown RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 TPBGQ13641 420 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 PUM1Q14671 1186 aaKnown RBP eCLIP9□□□□□ -0.97
CCDC40-212ENST00000574799 PLA1AQ53H76 456 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 HECTD3Q5T447 861 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SLC22A10Q63ZE4 541 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ACSM5Q6NUN0 579 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 ESPNLQ6ZVH7 1005 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 DNAJB7Q7Z6W7 309 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 RBM45Q8IUH3 476 aaKnown RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 OR5T2Q8NGG2 359 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 TREX2Q9BQ50 279 aaPredicted RBP9□□□□□ -0.97
CCDC40-212ENST00000574799 TTTY10Q9BZA0 68 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 RNF208Q9H0X6 261 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 KLHL31Q9H511 634 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 SLC25A19Q9HC21 320 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 LRFN2Q9ULH4 789 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 OR10H1Q9Y4A9 318 aa9□□□□□ -0.97
CCDC40-212ENST00000574799 M0R3H8 397 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 YY2O15391 372 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 RGS9O75916 674 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms