RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 WDR91A4D1P6 747 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 TMEM114B3SHH9 223 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 SYT5O00445 386 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 CTIFO43310 598 aaKnown RBP23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 IGKV1D-16P01601 117 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 ASCL1P50553 236 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 PSMD4P55036 377 aaKnown RBP23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 R3HCC1LQ7Z5L2 792 aaKnown RBP23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 MARCH3Q86UD3 253 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 OR7A2PQ8NGA2 310 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 FBXO30Q8TB52 745 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 DUSP19Q8WTR2 217 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 SLC9A6Q92581 669 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 GIMAP5Q96F15 307 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 RMND5BQ96G75 393 aaPredicted RBP23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 SH3GL2Q99962 352 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 C1orf50Q9BV19 199 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 SLC24A3Q9HC58 644 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 FAM120CQ9NX05 1096 aaKnown RBP23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 ATP6V1HQ9UI12 483 aa23.61■■□□□ 1.37
NPLOC4-215ENST00000574095 TTC36A6NLP5 189 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 RGS16O15492 202 aaPredicted RBP23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 NKX2-2O95096 273 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 KCNH1O95259 989 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 UTS2O95399 124 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 CHMP24386 653 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 CTSSP25774 331 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 MAPK1P28482 360 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 MAP3K8P41279 467 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 SERPINB4P48594 390 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 CLK3P49761 638 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 DGKQP52824 942 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 B3GALT5-AS1P59052 145 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 ATP6AP1LQ52LC2 224 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 C6orf136Q5SQH8 315 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 LRIG3Q6UXM1 1119 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 GALNT10Q86SR1 603 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 CDRT4Q8N9R6 151 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 NUDT8Q8WV74 236 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 HOXB13Q92826 284 aaPredicted RBP23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 G6PC3Q9BUM1 346 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 NTMQ9P121 344 aa23.6■■□□□ 1.37
NPLOC4-215ENST00000574095 CLCA1A8K7I4 914 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 SCAMP2O15127 329 aaKnown RBP23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 EMC8O43402 210 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 LYPLA1O75608 230 aaPredicted RBP23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 ACP2P11117 423 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 HK1P19367 917 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 HPCAL1P37235 193 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 CLDN18P56856 261 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 PTGR1Q14914 329 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 GRAMD1BQ3KR37 738 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 VPS26BQ4G0F5 336 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 IL23RQ5VWK5 629 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 APOOLQ6UXV4 268 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 ADGRE4PQ86SQ3 457 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 TMEM200AQ86VY9 491 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 ZZZ3Q8IYH5 903 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 PPP1R14CQ8TAE6 165 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 RNASE6Q93091 150 aaKnown RBP23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 C16orf58Q96GQ5 468 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 YIPF4Q9BSR8 244 aa23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 ZNF395Q9H8N7 513 aaPredicted RBP23.59■■□□□ 1.37
NPLOC4-215ENST00000574095 ITM2AO43736 263 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 TMIGD3P0DMS9 266 aaPredicted RBP23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 LAMP1P11279 417 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 ZNF708P17019 499 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 OPRM1P35372 400 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 KIR2DL3P43628 341 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 FOXF2Q12947 444 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 CDH24Q86UP0 819 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 FNDC5Q8NAU1 212 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 SLC16A11Q8NCK7 471 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 LRRC46Q96FV0 321 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 OTUB1Q96FW1 271 aaPredicted RBP23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 MS4A4EQ96PG1 132 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 TBL1XR1Q9BZK7 514 aa23.58■■□□□ 1.37
NPLOC4-215ENST00000574095 AKAP9Q99996 3911 aa23.58■■□□□ 1.36
NPLOC4-215ENST00000574095 MED12LQ86YW9 2145 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 ZWINTO95229 277 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 HSPA4LO95757 839 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 ANGPTL1O95841 491 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 DDX5P17844 614 aaKnown RBP23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 MLC1Q15049 377 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 DUSP5Q16690 384 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 FBXL19-AS1Q494R0 122 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 RAET1LQ5VY80 246 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 MFSD12Q6NUT3 480 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 FIGNL1Q6PIW4 674 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 OR5M1Q8NGP8 315 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 TUBGCP3Q96CW5 907 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 FAM120BQ96EK7 910 aaKnown RBP23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 TM9SF2Q99805 663 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 CENPHQ9H3R5 247 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 PTGES2Q9H7Z7 377 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 SIRT3Q9NTG7 399 aaPredicted RBP23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 CLCF1Q9UBD9 225 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 RAB21Q9UL25 225 aa23.57■■□□□ 1.36
NPLOC4-215ENST00000574095 A0A1W2PRB8 838 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 EEF1E1-BLOC1S5C9J1V9 151 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms