RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 KCNK9Q9NPC2 374 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 SLCO1B3Q9NPD5 702 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 GIMAP4Q9NUV9 329 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 DDX18Q9NVP1 670 aaKnown RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 NOP53Q9NZM5 478 aaKnown RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 MARCOQ9UEW3 520 aaPredicted RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 SH3BGRL2Q9UJC5 107 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 FBXL2Q9UKC9 423 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 GPR45Q9Y5Y3 372 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 KCNE3Q9Y6H6 103 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 ANKRD17O75179 2603 aaKnown RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 TRGV8A0A0C4DH27 118 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 CENPVL1A0A0U1RR11 272 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 A0A1B0GUH1 482 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 PRAMEF27A3QJZ7 478 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 OR14I1A6ND48 311 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 C9JVG2 144 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 E9PLN8 166 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 C19orf84I3L1E1 186 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 HDAC3O15379 428 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 CDC40O60508 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-210ENST00000572205 HCN1O60741 890 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 PDE9AO76083 593 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 TOXO94900 526 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 C6orf47O95873 294 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 HMGN2P05204 90 aaKnown RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 IGFBP2P18065 325 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 PRPS1L1P21108 318 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 EPHA3P29320 983 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 EVI2BP34910 448 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 PTGS2P35354 604 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 HPCAL1P37235 193 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 ADH7P40394 386 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 NRG3P56975 720 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 KCNJ2P63252 427 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 PSPHP78330 225 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 MRPS22P82650 360 aaKnown RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-210ENST00000572205 TMEM44Q2T9K0 475 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 CYP27C1Q4G0S4 372 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 EIPR1Q53HC9 387 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 SPANXN4Q5MJ08 99 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-210ENST00000572205 C6orf163Q5TEZ5 329 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 HLA-DQA1Q5Y7H0 255 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 TMEM198Q66K66 360 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 OR4F3Q6IEY1 312 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 ANGPTL8Q6UXH0 198 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 MAMDC2Q7Z304 686 aaPredicted RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 ADGRE4PQ86SQ3 457 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 LSRQ86X29 649 aaPredicted RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 SLC44A2Q8IWA5 706 aaPredicted RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 NAXEQ8NCW5 288 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 NEIL3Q8TAT5 605 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 SFXN5Q8TD22 340 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 ZNF75CPQ92670 426 aaPredicted RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 C7orf26Q96N11 449 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 NPAS1Q99742 590 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 VKORC1Q9BQB6 163 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 BHLHE41Q9C0J9 482 aaPredicted RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 PRDM14Q9GZV8 571 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 SLC52A3Q9NQ40 469 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 EQTNQ9NQ60 294 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 SERHLQ9NQF3 203 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 PFDN4Q9NQP4 134 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 SLC6A13Q9NSD5 602 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 THAP1Q9NVV9 213 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 TAS2R9Q9NYW1 312 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 CBLCQ9ULV8 474 aa7.9□□□□□ -1.14
SMG6-210ENST00000572205 BOKQ9UMX3 212 aaPredicted RBP7.9□□□□□ -1.14
SMG6-210ENST00000572205 ACOT7O00154 380 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 CCL21O00585 134 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 TP53I11O14683 189 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 GNB5O14775 395 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 OIP5O43482 229 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 FBXO24O75426 580 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 KCNK2O95069 426 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 SNX4O95219 450 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 NGFRP08138 427 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 NID1P14543 1247 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 DCTP40126 519 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 CDKN2CP42773 168 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 MRPL19P49406 292 aaKnown RBP7.89□□□□□ -1.15
SMG6-210ENST00000572205 MVDP53602 400 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 CLDN15P56746 228 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 UFM1P61960 85 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 PLGLB1Q02325 96 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 POU4F2Q12837 409 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 MAPK11Q15759 364 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 CD226Q15762 336 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 GRAMD1BQ3KR37 738 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 HHATQ5VTY9 493 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 AP1ARQ63HQ0 302 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 VASNQ6EMK4 673 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 SLC30A6Q6NXT4 461 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 R3HCC1LQ7Z5L2 792 aaKnown RBP7.89□□□□□ -1.15
SMG6-210ENST00000572205 GALNT10Q86SR1 603 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 CLEC4FQ8N1N0 589 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 ZNF808Q8N4W9 903 aaPredicted RBP7.89□□□□□ -1.15
SMG6-210ENST00000572205 CDRT4Q8N9R6 151 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms