RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 MMADHCQ9H3L0 296 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-209ENST00000571558 PACSIN3Q9UKS6 424 aa12.67□□□□□ -0.38
RPAIN-209ENST00000571558 DTX4Q9Y2E6 619 aa12.67□□□□□ -0.38
RPAIN-209ENST00000571558 AP3M1Q9Y2T2 418 aa12.67□□□□□ -0.38
RPAIN-209ENST00000571558 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
RPAIN-209ENST00000571558 NAV3Q8IVL0 2385 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 DYRK3O43781 588 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 SLC19A2O60779 497 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 DNAJA2O60884 412 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 COQ9O75208 318 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 SERPINA7P05543 415 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 SLC26A5P58743 744 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 EEF1A2Q05639 463 aaKnown RBP12.66□□□□□ -0.38
RPAIN-209ENST00000571558 LASP1Q14847 261 aaKnown RBP12.66□□□□□ -0.38
RPAIN-209ENST00000571558 FXNQ16595 210 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 CDC73Q6P1J9 531 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ZCCHC12Q6PEW1 402 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 SZRD1Q7Z422 152 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ULK2Q8IYT8 1036 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 LGI4Q8N135 537 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 FBXW8Q8N3Y1 598 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 RNF148Q8N7C7 305 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ACBD4Q8NC06 268 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 B3GNT7Q8NFL0 401 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 C16orf52Q8NHV5 167 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 PSMF1Q92530 271 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ART5Q96L15 291 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 VSTM2LQ96N03 204 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 LPAR4Q99677 370 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ECSITQ9BQ95 431 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ACTRT3Q9BYD9 372 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 OR8D2Q9GZM6 311 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ENKD1Q9H0I2 346 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 OR51I1Q9H343 314 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 RAD21L1Q9H4I0 556 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ALG2Q9H553 416 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 EQTNQ9NQ60 294 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 BCAP29Q9UHQ4 241 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ZNF223Q9UK11 482 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-209ENST00000571558 USP22Q9UPT9 525 aa12.66□□□□□ -0.38
RPAIN-209ENST00000571558 ANKHD1Q8IWZ3 2542 aaKnown RBP12.66□□□□□ -0.38
RPAIN-209ENST00000571558 NSG1A0A0A6YYJ2 146 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 FAM221AA4D161 298 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 ANKRD65E5RJM6 399 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 HMGN4O00479 90 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 ASNA1O43681 348 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 PDE5AO76074 875 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 NUDT7P0C024 238 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 ACP2P11117 423 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 CRATP43155 626 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 KRTAP10-9P60411 292 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 TXNL4AP83876 142 aaKnown RBP12.65□□□□□ -0.38
RPAIN-209ENST00000571558 ADORA2A-AS1P86434 159 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 TLE4Q04727 773 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 MAPK11Q15759 364 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 KRTCAP3Q53RY4 240 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 TNFAIP8L2Q6P589 184 aaPredicted RBP12.65□□□□□ -0.38
RPAIN-209ENST00000571558 ANGPTL8Q6UXH0 198 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 NDUFAF7Q7L592 441 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 C9orf40Q8IXQ3 194 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 ZZZ3Q8IYH5 903 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 SLC16A11Q8NCK7 471 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 OR5D16Q8NGK9 328 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 THAP3Q8WTV1 239 aaPredicted RBP12.65□□□□□ -0.38
RPAIN-209ENST00000571558 NCLNQ969V3 563 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 MCUR1Q96AQ8 359 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 REXO5Q96IC2 774 aaKnown RBP12.65□□□□□ -0.38
RPAIN-209ENST00000571558 YIPF4Q9BSR8 244 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 LMF2Q9BU23 707 aaKnown RBP12.65□□□□□ -0.38
RPAIN-209ENST00000571558 SPATA9Q9BWV2 254 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.65□□□□□ -0.38
RPAIN-209ENST00000571558 PIF1Q9H611 641 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 FOLH1BQ9HBA9 442 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 ZNF160Q9HCG1 818 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 GIN1Q9NXP7 522 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 PCDHGB6Q9Y5F9 930 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 SPG11Q96JI7 2443 aa12.65□□□□□ -0.38
RPAIN-209ENST00000571558 PRAMEF27A3QJZ7 478 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 OR6C76A6NM76 312 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 FAM220BPB1ANY3 271 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 ICAM2P13598 275 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 MATN1P21941 496 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 MST1P26927 711 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 PRIM2P49643 509 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 KHKP50053 298 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 EBPQ15125 230 aaKnown RBP12.64□□□□□ -0.39
RPAIN-209ENST00000571558 DUSP5Q16690 384 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 PLAG1Q6DJT9 500 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 RNF111Q6ZNA4 994 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 WDR53Q7Z5U6 358 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-209ENST00000571558 CDRT4Q8N9R6 151 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 FAM156AQ8NDB6 213 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 FBXO30Q8TB52 745 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 ELP5Q8TE02 316 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 RAB8BQ92930 207 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 OTUB1Q96FW1 271 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-209ENST00000571558 SLC35A4Q96G79 324 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 BTBD9Q96Q07 612 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 OR7D2Q96RA2 312 aa12.64□□□□□ -0.39
RPAIN-209ENST00000571558 TREX2Q9BQ50 279 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms