RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CHST10O43529 356 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 AIFM1O95831 613 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 ELAVL3Q14576 367 aaKnown RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 NDUFA9Q16795 377 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 C12orf73Q69YU5 71 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 ZNF793Q6ZN11 406 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 FAM26EQ8N5C1 309 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 NCKAP1Q9Y2A7 1128 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 NPIPB8E9PQR5 432 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 DPM1O60762 260 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 DHFRP00374 187 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 OR10A3P58181 314 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 GPLD1P80108 840 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 RPL6Q02878 288 aaKnown RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 RAB40BQ12829 278 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 SUZ12Q15022 739 aaKnown RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 FAM98AQ8NCA5 519 aaKnown RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 SIMC1Q8NDZ2 872 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 OR2T33Q8NG76 320 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 CNRIP1Q96F85 164 aaPredicted RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 BTBD1Q9H0C5 482 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 MBNL1Q9NR56 388 aaKnown RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 GTF2A1LQ9UNN4 478 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 PRR23D1E9PI22 279 aaPredicted RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 FKTNO75072 461 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 PRR23D2P0DMB1 279 aaPredicted RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 PIPP12273 146 aaPredicted RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 PRKCAP17252 672 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 RPL4P36578 427 aaKnown RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 HCCSP53701 268 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 ARPC4P59998 168 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 CSNK1G2P78368 415 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 FAPQ12884 760 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 ODF4Q2M2E3 257 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 YAF2Q8IY57 180 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 RSPO3Q9BXY4 272 aaPredicted RBP14.36□□□□□ -0.11
USP43-202ENST00000570475 DPEP2Q9H4A9 486 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 BRD7Q9NPI1 651 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 MAU2Q9Y6X3 613 aa14.36□□□□□ -0.11
USP43-202ENST00000570475 TRAV27A0A087WT01 109 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ABHD14A-ACY1A0A1B0GW23 586 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 A0A1W2PRQ8 180 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 LIMS3P0CW19 117 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 LIMS4P0CW20 117 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ELK1P19419 428 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 PDX1P52945 283 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 CDK3Q00526 305 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 RNF44Q7L0R7 432 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ACBD7Q8N6N7 88 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ZNF431Q8TF32 576 aaPredicted RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 SLC41A3Q96GZ6 507 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 LRRC3BQ96PB8 259 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ZNF717Q9BY31 904 aaPredicted RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 ZBP1Q9H171 429 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 OR52A5Q9H2C5 316 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ING4Q9UNL4 249 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 XIRP2A4UGR9 3374 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 IQCMA0A1B0GVH7 501 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 FAM171A2A8MVW0 826 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 PROM1O43490 865 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 KLHL18O94889 574 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 CCL5P13501 91 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 CPEP16870 476 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 BCL6P41182 706 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 CCR4P51679 360 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 DUSP2Q05923 314 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 HYAL4Q2M3T9 481 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 SERPINA12Q8IW75 414 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 NRSN1Q8IZ57 195 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 OR13C5Q8NGS8 318 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 OSTF1Q92882 214 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ORAI1Q96D31 301 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 RNF31Q96EP0 1072 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 LMLNQ96KR4 655 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ALG8Q9BVK2 526 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 LSM2Q9Y333 95 aaKnown RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 PLXNA3P51805 1871 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 SCN5AQ14524 2016 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 EDDM13A0A1B0GTR0 161 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ARSBP15848 533 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 EVI2BP34910 448 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 LIMS1P48059 325 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 ELOAQ14241 798 aaKnown RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 NTRK2Q16620 822 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 OCLNQ16625 522 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 HNRNPA1L2Q32P51 320 aaKnown RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 Q5BKY6 102 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 SFRP4Q6FHJ7 346 aaPredicted RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 ANKRD54Q6NXT1 300 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 CLDN22Q8N7P3 220 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 OR6K6Q8NGW6 343 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 OR5K2Q8NHB8 316 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 COQ10AQ96MF6 247 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 CAMK1GQ96NX5 476 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 B3GAT2Q9NPZ5 323 aa14.35□□□□□ -0.11
USP43-202ENST00000570475 HINT3Q9NQE9 182 aaKnown RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 RBFOX1Q9NWB1 397 aaKnown RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 EIF3KQ9UBQ5 218 aaKnown RBP14.35□□□□□ -0.11
USP43-202ENST00000570475 SERTM1A2A2V5 107 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms