RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 C2orf69Q8N8R5 385 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 PITX2Q99697 317 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 EBPLQ9BY08 206 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 GABARAPL3Q9BY60 117 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SRRQ9GZT4 340 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 SPATC1LQ9H0A9 340 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 C11orf49Q9H6J7 331 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 NMNAT1Q9HAN9 279 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 EVA1BQ9NVM1 165 aa6.75□□□□□ -1.33
CNOT1-216ENST00000569240 ARHGEF28Q8N1W1 1705 aaKnown RBP6.75□□□□□ -1.33
CNOT1-216ENST00000569240 A0A0A6YYH2 397 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 A6NJ64 397 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 EMC8O43402 210 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 FZD7O75084 574 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 S1PR4O95977 384 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 LGALS2P05162 132 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 RRASP10301 218 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MRPL19P49406 292 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 KIAA1024LP59773 190 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 CLDN10P78369 228 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 TNK1Q13470 666 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MOGAT2Q3SYC2 334 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SPICQ8N5J4 248 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 OR4M1Q8NGD0 313 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ST7LQ8TDW4 575 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ADAMTS18Q8TE60 1221 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PPP1R13LQ8WUF5 828 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 IMP4Q96G21 291 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SCMH1Q96GD3 660 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ZC3HAV1LQ96H79 300 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SLCO3A1Q9UIG8 710 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 TRAV19A0A0A6YYK7 116 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 LRP5LA4QPB2 252 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MOXD2PA6NHM9 499 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 HMSDA8MTL9 139 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 CHRM5P08912 532 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 DRD5P21918 477 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 TEX30Q5JUR7 227 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 C14orf80Q86SX3 495 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 DNAJC5GQ8N7S2 189 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PLA2G15Q8NCC3 412 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PMM1Q92871 262 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 NTMT1Q9BV86 223 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 BTBD2Q9BX70 525 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 HDHD5Q9BXW7 423 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 RAB9BQ9NP90 201 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PPP1R14DQ9NXH3 145 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ZCWPW2A0A1B0GU75 182 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 HLA-DQB2P05538 268 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 FUT4P22083 530 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 TNFSF9P41273 254 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SCAND1P57086 179 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 RAP1AP62834 184 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SLBPQ14493 270 aaKnown RBP eCLIP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 P2RY14Q15391 338 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 GGTA1PQ4G0N0 100 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SLC39A12Q504Y0 691 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MS4A13Q5J8X5 152 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 RAET1GQ6H3X3 334 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PPP1R3BQ86XI6 285 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 WDR48Q8TAF3 677 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 C14orf79Q96F83 325 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 WRAP53Q9BUR4 548 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 GPR88Q9GZN0 384 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 OR2AG1Q9H205 316 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MYOZ2Q9NPC6 264 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 WDR45Q9Y484 360 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 TSPAN11A1L157 253 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF254O75437 659 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ENDOD1O94919 500 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MT-CYBP00156 380 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 VTNP04004 478 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MMP10P09238 476 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SHMT2P34897 504 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 GDNFP39905 211 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 HTD2P86397 168 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MAP4K2Q12851 820 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 RBM39Q14498 530 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ACOT6Q3I5F7 207 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 CLEC12AQ5QGZ9 265 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PRAMEF14Q5SWL7 426 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 C15orf39Q6ZRI6 1047 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 USP51Q70EK9 711 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 COX15Q7KZN9 410 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 VTCN1Q7Z7D3 282 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 NAA40Q86UY6 237 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ZFP82Q8N141 532 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ASB17Q8WXJ9 295 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 CPNE4Q96A23 557 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 NOL4LQ96MY1 436 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 P2RX7Q99572 595 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 G6PC3Q9BUM1 346 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PPLO60437 1756 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 CCDC85CA6NKD9 419 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 K7EPK0 472 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 LRRC37A5PQ49AS3 106 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 COX19Q49B96 90 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SIRPB2Q5JXA9 342 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PRAMEF8Q5VWM4 474 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms