RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PIP5K1AQ99755 562 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 KLHL4Q9C0H6 718 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 RNF122Q9H9V4 155 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.97□□□□□ -0.17
NME3-211ENST00000568561 C16orf97H3BN30 126 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 EMC8O43402 210 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 COQ9O75208 318 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 AQP8O94778 261 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 TAC1P20366 129 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 FPR1P21462 350 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 ECHS1P30084 290 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 LGSNQ5TDP6 509 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 SAMD14Q8IZD0 417 aaPredicted RBP13.96□□□□□ -0.17
NME3-211ENST00000568561 DUSP19Q8WTR2 217 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 C1GALT1C1Q96EU7 318 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 SLC39A3Q9BRY0 314 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 STMN4Q9H169 189 aaPredicted RBP13.96□□□□□ -0.17
NME3-211ENST00000568561 ELOVL5Q9NYP7 299 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 CLEC4AQ9UMR7 237 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 PROCRQ9UNN8 238 aa13.96□□□□□ -0.17
NME3-211ENST00000568561 ANK3Q12955 4377 aaKnown RBP13.95□□□□□ -0.18
NME3-211ENST00000568561 FAM171A2A8MVW0 826 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 MYO1GB0I1T2 1018 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 TNFRSF21O75509 655 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 SNRPAP09012 282 aaKnown RBP13.95□□□□□ -0.18
NME3-211ENST00000568561 CD8BP10966 210 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 DDCP20711 480 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 MPIP34949 423 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 FOXA1P55317 472 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 PSPHP78330 225 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 ZNF763Q0D2J5 394 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 C2orf80Q0P641 193 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 SPDYAQ5MJ70 313 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 GALNT10Q86SR1 603 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 NOA1Q8NC60 698 aaKnown RBP13.95□□□□□ -0.18
NME3-211ENST00000568561 C11orf24Q96F05 449 aaPredicted RBP13.95□□□□□ -0.18
NME3-211ENST00000568561 FMO2Q99518 471 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 MDFIQ99750 246 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 PTGES2Q9H7Z7 377 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 DDX18Q9NVP1 670 aaKnown RBP13.95□□□□□ -0.18
NME3-211ENST00000568561 FAM120CQ9NX05 1096 aaKnown RBP13.95□□□□□ -0.18
NME3-211ENST00000568561 ABCG2Q9UNQ0 655 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 ZNF175Q9Y473 711 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 POLR3HQ9Y535 204 aaPredicted RBP13.95□□□□□ -0.18
NME3-211ENST00000568561 RTTNQ86VV8 2226 aa13.95□□□□□ -0.18
NME3-211ENST00000568561 A0A087WUV0 522 aaPredicted RBP13.94□□□□□ -0.18
NME3-211ENST00000568561 EXOC1LA0A1B0GW35 172 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 GXYLT2A0PJZ3 443 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 INAFM1C9JVW0 142 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 GOLGA8RI6L899 631 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 UPK1AO00322 258 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 PSMG1O95456 288 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 OPN1LWP04000 364 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 THBDP07204 575 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 ATP5F1P24539 256 aaPredicted RBP13.94□□□□□ -0.18
NME3-211ENST00000568561 GCAP28676 217 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 SLC6A8P48029 635 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 PTH2RP49190 550 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 PCYT1AP49585 367 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 EEFSECP57772 596 aaKnown RBP13.94□□□□□ -0.18
NME3-211ENST00000568561 LCP2Q13094 533 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 GANABQ14697 944 aaKnown RBP13.94□□□□□ -0.18
NME3-211ENST00000568561 GUSBP1Q15486 140 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 DECR1Q16698 335 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 GALNT18Q6P9A2 607 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 APOOLQ6UXV4 268 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 C20orf204Q6ZNR8 217 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 GGNQ86UU5 652 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 SLC9A6Q92581 669 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 BDH2Q9BUT1 245 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 GLIPR2Q9H4G4 154 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 Q9N2J8 555 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 EQTNQ9NQ60 294 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 MIEF1Q9NQG6 463 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 C19orf53Q9UNZ5 99 aaPredicted RBP13.94□□□□□ -0.18
NME3-211ENST00000568561 VDAC3Q9Y277 283 aa13.94□□□□□ -0.18
NME3-211ENST00000568561 A0A087WV62 115 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 UQCRHLA0A096LP55 91 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.93□□□□□ -0.18
NME3-211ENST00000568561 EIF1AYO14602 144 aaKnown RBP13.93□□□□□ -0.18
NME3-211ENST00000568561 UTS2O95399 124 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 IL33O95760 270 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 ANGPTL1O95841 491 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 PLAUP00749 431 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 IGKV1D-16P01601 117 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 ENO1P06733 434 aaKnown RBP13.93□□□□□ -0.18
NME3-211ENST00000568561 NID1P14543 1247 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 IMPDH1P20839 514 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 TBXA2RP21731 343 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 NTSP30990 170 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 EIF1AXP47813 144 aaKnown RBP13.93□□□□□ -0.18
NME3-211ENST00000568561 SGCBQ16585 318 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 CYP27C1Q4G0S4 372 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 FAM71E1Q6IPT2 247 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 FAM214BQ7L5A3 538 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 OR2L13Q8N349 312 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 METTL25Q8N6Q8 603 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 PIK3R3Q92569 461 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms