RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	LGALS3BP	Q08380	585 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	TBX2	Q13207	712 aa	Predicted RBP	12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	PRICKLE4	Q2TBC4	344 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	GLYR1	Q49A26	553 aa	Predicted RBP	12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	TMEM201	Q5SNT2	666 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	SLC22A25	Q6T423	547 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	TFAP2E	Q6VUC0	442 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	BHLHA15	Q7RTS1	189 aa	Predicted RBP	12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	TRIM46	Q7Z4K8	759 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	GGN	Q86UU5	652 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	RNF175	Q8N4F7	328 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	OR52R1	Q8NGF1	315 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	SIGLEC10	Q96LC7	697 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	ZNF747	Q9BV97	191 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	DDX31	Q9H8H2	851 aa	Known RBP	12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	SDHAF3	Q9NRP4	125 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	SLC17A6	Q9P2U8	582 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	MGAT4B	Q9UQ53	548 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	PCDHGB1	Q9Y5G3	927 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	LOC390937	A0A1W2PQ73	354 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	SMAD9	O15198	467 aa	Known RBP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	TSPAN2	O60636	221 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	NTN1	O95631	604 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	EPOR	P19235	508 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	MRPS22	P82650	360 aa	Known RBP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	MAP4K2	Q12851	820 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	E2F2	Q14209	437 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	ACAP2	Q15057	778 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	SULT1C3	Q6IMI6	304 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	ZNF544	Q6NX49	715 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	TMEM108	Q6UXF1	575 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737		Q6ZSR9	355 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	SSX8	Q7RTT4	187 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	GALNT10	Q86SR1	603 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	PEG10	Q86TG7	708 aa	Known RBP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	NUDT13	Q86X67	352 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	TXLNB	Q8N3L3	684 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	ZNF540	Q8NDQ6	660 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	OR2W6P	Q8NHA6	318 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	HUS1B	Q8NHY5	278 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	RNF138	Q8WVD3	245 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	C1GALT1C1	Q96EU7	318 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	FOXN4	Q96NZ1	517 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	TRMO	Q9BU70	441 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	ZNF717	Q9BY31	904 aa	Predicted RBP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	PPAN	Q9NQ55	473 aa	Known RBP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	MAT2B	Q9NZL9	334 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	ZKSCAN5	Q9Y2L8	839 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	REXO2	Q9Y3B8	237 aa	Known RBP	12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	CAD	P27708	2225 aa		12.18	□□□□□ -0.46
SMG1-213	ENST00000567737	CXCL13	O43927	109 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	RGS9	O75916	674 aa	Predicted RBP	12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	DHRS4L1	P0CG22	281 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	EVI2B	P34910	448 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	BSG	P35613	385 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	PIK3CB	P42338	1070 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	MAGEA3	P43357	314 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	LIMS1	P48059	325 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	PNLIPRP2	P54317	469 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	PHEX	P78562	749 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	STX5	Q13190	355 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	ZNF460	Q14592	562 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	LGSN	Q5TDP6	509 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	DEF8	Q6ZN54	512 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	WDR75	Q8IWA0	830 aa	Known RBP	12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	LINC01356	Q8N9X3	169 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	ANKRD49	Q8WVL7	239 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	MTERF1	Q99551	399 aa	Known RBP	12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	ZNF639	Q9UID6	485 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	PCDHB10	Q9UN67	800 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	NOTCH1	P46531	2555 aa		12.17	□□□□□ -0.46
SMG1-213	ENST00000567737	GOLGA8Q	A0A0J9YX86	632 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	GOLGA8O	A6NCC3	632 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	GOLGA6L10	A6NI86	522 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	GOLGA8N	F8WBI6	632 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	GOLGA8R	I6L899	631 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	LCE2B	O14633	110 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	TTC4	O95801	387 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	CBX7	O95931	251 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	GBA	P04062	536 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	ATP1B1	P05026	303 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	PABPC4L	P0CB38	370 aa	Known RBP	12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	COL6A2	P12110	1019 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	PTX3	P26022	381 aa	Predicted RBP	12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	EMD	P50402	254 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	PSPH	P78330	225 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	MGAT2	Q10469	447 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	CDKL4	Q5MAI5	379 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	SPANXN3	Q5MJ09	141 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	TEDDM1	Q5T9Z0	273 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	LRRC70	Q7Z2Q7	622 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	NUFIP2	Q7Z417	695 aa	Known RBP	12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	TDRP	Q86YL5	185 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	CEP112	Q8N8E3	955 aa		12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	UHMK1	Q8TAS1	419 aa	Known RBP	12.16	□□□□□ -0.46
SMG1-213	ENST00000567737	EFHD2	Q96C19	240 aa	Predicted RBP	12.16	□□□□□ -0.46

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