RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 APOOLQ6UXV4 268 aa20.59■□□□□ 0.89
CNEP1R1-209ENST00000567712 METTL6Q8TCB7 284 aa20.59■□□□□ 0.89
CNEP1R1-209ENST00000567712 C1GALT1C1Q96EU7 318 aa20.59■□□□□ 0.89
CNEP1R1-209ENST00000567712 NPAS1Q99742 590 aa20.59■□□□□ 0.89
CNEP1R1-209ENST00000567712 KLHL4Q9C0H6 718 aa20.59■□□□□ 0.89
CNEP1R1-209ENST00000567712 TAS2R9Q9NYW1 312 aa20.59■□□□□ 0.89
CNEP1R1-209ENST00000567712 KLF4O43474 513 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 GMFGO60234 142 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 ULK1O75385 1050 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 PTH2RP49190 550 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 ETF1P62495 437 aaKnown RBP20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 TMEM107Q6UX40 140 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 GPRIN3Q6ZVF9 776 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 METTL25Q8N6Q8 603 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 SLC39A3Q9BRY0 314 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 ZNF175Q9Y473 711 aa20.58■□□□□ 0.89
CNEP1R1-209ENST00000567712 COL6A5A8TX70 2615 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 UPK1AO00322 258 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 PSMG1O95456 288 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 TBXA2RP21731 343 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 GCAP28676 217 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 ECHS1P30084 290 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 HMOX2P30519 316 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 MPIP34949 423 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 FOXA1P55317 472 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 ACSM2AQ08AH3 577 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 CHD3Q12873 2000 aaKnown RBP20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 CAPRIN1Q14444 709 aaKnown RBP20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 HEPACAMQ14CZ8 416 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 EXOC3L2Q2M3D2 409 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 TMEM44Q2T9K0 475 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 ACSM2BQ68CK6 577 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 GALNT18Q6P9A2 607 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 C20orf204Q6ZNR8 217 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 GGNQ86UU5 652 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 SAMD14Q8IZD0 417 aaPredicted RBP20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 DTNBP1Q96EV8 351 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 BBS4Q96RK4 519 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 GSX2Q9BZM3 304 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 GIMAP4Q9NUV9 329 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 SENP1Q9P0U3 644 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 ZNF180Q9UJW8 692 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 CLEC4AQ9UMR7 237 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 PROCRQ9UNN8 238 aa20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 C19orf53Q9UNZ5 99 aaPredicted RBP20.57■□□□□ 0.88
CNEP1R1-209ENST00000567712 A0A087WV62 115 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 CNOT4O95628 575 aaKnown RBP20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 IGKV1D-16P01601 117 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 DDCP20711 480 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 NCBP2P52298 156 aaKnown RBP eCLIP20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 PSPHP78330 225 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 C2orf80Q0P641 193 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 GANABQ14697 944 aaKnown RBP20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 CYP27C1Q4G0S4 372 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 SPIN4Q56A73 249 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 FAM214BQ7L5A3 538 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 STMN4Q9H169 189 aaPredicted RBP20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 GLIPR2Q9H4G4 154 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 ABCG2Q9UNQ0 655 aa20.56■□□□□ 0.88
CNEP1R1-209ENST00000567712 CR1P17927 2039 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 GXYLT2A0PJZ3 443 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 IL33O95760 270 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 ANXA4P09525 319 aaPredicted RBP20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 NID1P14543 1247 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 IMPDH1P20839 514 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 RFX3P48380 749 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 EEFSECP57772 596 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 MRPS22P82650 360 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 LGSNQ5TDP6 509 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 FAM71E1Q6IPT2 247 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 CDC26Q8NHZ8 85 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 KLHDC3Q9BQ90 382 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 FAM120CQ9NX05 1096 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 SIRT5Q9NXA8 310 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 ATRQ13535 2644 aa20.55■□□□□ 0.88
CNEP1R1-209ENST00000567712 UBFD1O14562 309 aaKnown RBP20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 COQ9O75208 318 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 KRTAP1-1Q07627 177 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 DECR1Q16698 335 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 STAC2Q6ZMT1 411 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 PLEKHM3Q6ZWE6 761 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 OR2L13Q8N349 312 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 LMF2Q9BU23 707 aaKnown RBP20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 SDHAF3Q9NRP4 125 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 PLSCR4Q9NRQ2 329 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 CADP27708 2225 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 CUBNO60494 3623 aa20.54■□□□□ 0.88
CNEP1R1-209ENST00000567712 ABCA1O95477 2261 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 IGLV3-32A0A0A0MS00 114 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 LINC01387J3KSC0 135 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 UTS2O95399 124 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 OPN1LWP04000 364 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 SNRPAP09012 282 aaKnown RBP20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 NR1H2P55055 460 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 GRAMD1BQ3KR37 738 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 PIK3R3Q92569 461 aa20.53■□□□□ 0.88
CNEP1R1-209ENST00000567712 ELP4Q96EB1 424 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms