RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SLC22A14Q9Y267 594 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 FIS1Q9Y3D6 152 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 TNPO3Q9Y5L0 923 aaKnown RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 TMEM233B4DJY2 109 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 OR7A17O14581 309 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 KLF11O14901 512 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 SNNO75324 88 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 TGM6O95932 706 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 CD8AP01732 235 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 COX7A2P14406 83 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 GGT5P36269 586 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 HNF4AP41235 474 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 IRX1P78414 480 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 SF3A3Q12874 501 aaKnown RBP eCLIP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 LCP2Q13094 533 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 NTRK2Q16620 822 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 OCLNQ16625 522 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 IQCCQ4KMZ1 466 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 NCMAPQ5T1S8 102 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 AAGABQ6PD74 315 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 RINLQ6ZS11 566 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 CLNKQ7Z7G1 428 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 LRRC56Q8IYG6 542 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 TAGAPQ8N103 731 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF781Q8N8C0 355 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF321PQ8N8H1 164 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 OR52B6Q8NGF0 335 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 OR1J4Q8NGS1 313 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 OR56A3Q8NH54 315 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 NT5CQ8TCD5 201 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 UTP15Q8TED0 518 aaKnown RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 PTPMT1Q8WUK0 201 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 NEUROG1Q92886 237 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 THOC1Q96FV9 657 aaKnown RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 FAR2Q96K12 515 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 OR4K3Q96R72 315 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 SORT1Q99523 831 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 OR10A4Q9H209 315 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 NOL11Q9H8H0 719 aaKnown RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 IPPKQ9H8X2 491 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 ZBTB26Q9HCK0 441 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 TNFRSF12AQ9NP84 129 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 THAP1Q9NVV9 213 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 CISD1Q9NZ45 108 aaKnown RBP8.69□□□□□ -1.02
CAPN3-216ENST00000567071 PTGDR2Q9Y5Y4 395 aa8.69□□□□□ -1.02
CAPN3-216ENST00000567071 PLCE1Q9P212 2302 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 A0A088AWK7 358 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 NDUFS8O00217 210 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 GNB5O14775 395 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 HCRTR2O43614 444 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 EDF1O60869 148 aaKnown RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 SHOX2O60902 331 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 CRCPO75575 148 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 RGS9O75916 674 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 OR4F21O95013 312 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 CGAP01215 116 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 KITP10721 976 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 CDH1P12830 882 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 EPB42P16452 691 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 EPORP19235 508 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF10P21506 573 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 PIK3CGP48736 1102 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 TMED10P49755 219 aaKnown RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 PDLIM4P50479 330 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 CCNG1P51959 295 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 FUT7Q11130 342 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 TRAF3Q13114 568 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 SERTAD2Q14140 314 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 RPS6KA2Q15349 733 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 SH2D4BQ5SQS7 431 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 STAC2Q6ZMT1 411 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 GPRIN3Q6ZVF9 776 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 USP43Q70EL4 1123 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 SLC29A4Q7RTT9 530 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 TMPRSS11BQ86T26 416 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 IFNEQ86WN2 208 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 MYLK4Q86YV6 388 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 KLHDC8AQ8IYD2 350 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 KBTBD8Q8NFY9 601 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 ATP6V1E2Q96A05 226 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 CHMP6Q96FZ7 201 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 C7orf26Q96N11 449 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF317Q96PQ6 595 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 KCNA7Q96RP8 456 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF382Q96SR6 550 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 TRMOQ9BU70 441 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 G6PC3Q9BUM1 346 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 ALOXE3Q9BYJ1 711 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 ACTR8Q9H981 624 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 PNPOQ9NVS9 261 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 TEX10Q9NXF1 929 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-216ENST00000567071 VTI1BQ9UEU0 232 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
CAPN3-216ENST00000567071 TRBC2A0A5B9 178 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 GMNCA6NCL1 334 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CLGNO14967 610 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 SMAD9O15198 467 aaKnown RBP8.67□□□□□ -1.02
CAPN3-216ENST00000567071 PRAMEF4O60810 478 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms