RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HK1P19367 917 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 GABRA3P34903 492 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 CPA2P48052 419 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 IST1P53990 364 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 DIO3P55073 304 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 RIPPLY3P57055 190 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 EEFSECP57772 596 aaKnown RBP18.25■□□□□ 0.51
CLN6-207ENST00000566347 STX5Q13190 355 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 RAET1LQ5VY80 246 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 MEIOBQ8N635 442 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 OR2T11Q8NH01 316 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 TBL1XR1Q9BZK7 514 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 EML4Q9HC35 981 aaKnown RBP18.25■□□□□ 0.51
CLN6-207ENST00000566347 HHATLQ9HCP6 504 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 EQTNQ9NQ60 294 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 MED11Q9P086 117 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 DNAJC15Q9Y5T4 150 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 C2CD3Q4AC94 2353 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 C17orf51A8MQB3 221 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 LSM1O15116 133 aaKnown RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 NPHS1O60500 1241 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 FGF4P08620 206 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 NUDT17P0C025 328 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 LINC00032P0C843 101 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 ASMTP46597 345 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 RFX3P48380 749 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 MANFP55145 182 aaKnown RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 RPL38P63173 70 aaKnown RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 PDE7AQ13946 482 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 GLYR1Q49A26 553 aaPredicted RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 RFTN2Q52LD8 501 aaPredicted RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 FBXW10Q5XX13 1052 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 OR2A2Q6IF42 318 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 ANKRD26P1Q6NSI1 321 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 P4HA3Q7Z4N8 544 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 LUZP2Q86TE4 346 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 TRABD2AQ86V40 505 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 CDC20BQ86Y33 519 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 GCNT2Q8N0V5 402 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 BANPQ8N9N5 519 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 CDRT4Q8N9R6 151 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 DUSP19Q8WTR2 217 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 HOXB13Q92826 284 aaPredicted RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 CIDECQ96AQ7 238 aaPredicted RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 MTERF3Q96E29 417 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 TSSK3Q96PN8 268 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 FOXC2Q99958 501 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 TUBB1Q9H4B7 451 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 ACSS1Q9NUB1 689 aaPredicted RBP18.24■□□□□ 0.51
CLN6-207ENST00000566347 FLRT3Q9NZU0 649 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 SH3BP4Q9P0V3 963 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 PACSIN3Q9UKS6 424 aa18.24■□□□□ 0.51
CLN6-207ENST00000566347 AKAP10O43572 662 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 UTS2O95399 124 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 CRHP06850 196 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 ALDH3A1P30838 453 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 FRKP42685 505 aaPredicted RBP18.23■□□□□ 0.51
CLN6-207ENST00000566347 PRR5P85299 388 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 C17orf67Q0P5P2 114 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 PLXDC2Q6UX71 529 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 R3HCC1LQ7Z5L2 792 aaKnown RBP18.23■□□□□ 0.51
CLN6-207ENST00000566347 MARCH3Q86UD3 253 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 DDIASQ8IXT1 998 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 OR2W6PQ8NHA6 318 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 LINC01560Q8TB33 94 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 GPR151Q8TDV0 419 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 TWIST2Q8WVJ9 160 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 C1GALT1C1Q96EU7 318 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 FAM111AQ96PZ2 611 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 PIGQQ9BRB3 760 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 ANKZF1Q9H8Y5 726 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 CCM2LQ9NUG4 571 aaPredicted RBP18.23■□□□□ 0.51
CLN6-207ENST00000566347 GALNT8Q9NY28 637 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 NTMQ9P121 344 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 TRAF6Q9Y4K3 522 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 ABCA4P78363 2273 aa18.23■□□□□ 0.51
CLN6-207ENST00000566347 MAP1AP78559 2803 aaPredicted RBP18.22■□□□□ 0.51
CLN6-207ENST00000566347 IGLV3-32A0A0A0MS00 114 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 A0A1W2PNV4 684 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 GXYLT2A0PJZ3 443 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 SLC22A20A6NK97 555 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 NKX2-2O95096 273 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 TGM6O95932 706 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 DNASE1P24855 282 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 MAP3K8P41279 467 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 IFFO1Q0D2I5 559 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 GALNTL6Q49A17 601 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 ZNF385BQ569K4 471 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 ARL13AQ5H913 290 aaPredicted RBP18.22■□□□□ 0.51
CLN6-207ENST00000566347 LRIG3Q6UXM1 1119 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 UBQLNLQ8IYU4 475 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 CHDHQ8NE62 594 aaPredicted RBP18.22■□□□□ 0.51
CLN6-207ENST00000566347 NUP43Q8NFH3 380 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 PIK3R3Q92569 461 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 DACH2Q96NX9 599 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 MS4A4EQ96PG1 132 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 RTN4RQ9BZR6 473 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 CXXC4Q9H2H0 198 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 BAIAP2L1Q9UHR4 511 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 LGALS13Q9UHV8 139 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms