RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 PKNOX1P55347 436 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 CTBP2P56545 445 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 CLDN15P56746 228 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 BTKQ06187 659 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 STX5Q13190 355 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 BEX5Q5H9J7 111 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 SPDYAQ5MJ70 313 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 GTF2IRD2BQ6EKJ0 949 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 PPP4R4Q6NUP7 873 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 GALNT18Q6P9A2 607 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 NPSR1Q6W5P4 371 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 ZNF550Q7Z398 422 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 ZNF572Q7Z3I7 529 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-211ENST00000564815 GTF2IRD2Q86UP8 949 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 STK32CQ86UX6 486 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 LCA5Q86VQ0 697 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 SLC22A9Q8IVM8 553 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 MMGT1Q8N4V1 131 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 OR7G2Q8NG99 324 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 OR4N2Q8NGD1 307 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 PLSCR4Q9NRQ2 329 aa12.8□□□□□ -0.36
COMMD4-211ENST00000564815 DMGDHQ9UI17 866 aaKnown RBP12.8□□□□□ -0.36
COMMD4-211ENST00000564815 HIVEP2P31629 2446 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-211ENST00000564815 MYO1GB0I1T2 1018 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 KCNH1O95259 989 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 CNOT4O95628 575 aaKnown RBP12.79□□□□□ -0.36
COMMD4-211ENST00000564815 CGAP01215 116 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 DDCP20711 480 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 NTSP30990 170 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 PSG6Q00889 435 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 EXOC3L2Q2M3D2 409 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 UNC50Q53HI1 259 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 ZNF678Q5SXM1 525 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 ANKRD34AQ69YU3 496 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 SYT10Q6XYQ8 523 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 SH2D5Q6ZV89 423 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 CNPY4Q8N129 248 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 CIARTQ8N365 385 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-211ENST00000564815 METTL25Q8N6Q8 603 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 C1GALT1C1Q96EU7 318 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 APIPQ96GX9 242 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 ACPTQ9BZG2 426 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 CDC42EP4Q9H3Q1 356 aaKnown RBP12.79□□□□□ -0.36
COMMD4-211ENST00000564815 GLRX2Q9NS18 164 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
COMMD4-211ENST00000564815 SIRT5Q9NXA8 310 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 TAS2R7Q9NYW3 318 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 ZNF225Q9UK10 706 aa12.79□□□□□ -0.36
COMMD4-211ENST00000564815 MCTS1Q9ULC4 181 aaKnown RBP12.79□□□□□ -0.36
COMMD4-211ENST00000564815 C19orf53Q9UNZ5 99 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-211ENST00000564815 JMJD1CQ15652 2540 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 SIAH2O43255 324 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 NME6O75414 186 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-211ENST00000564815 SYNGR4O95473 234 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 IL33O95760 270 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 JUNP05412 331 aaKnown RBP12.78□□□□□ -0.36
COMMD4-211ENST00000564815 CHN1P15882 459 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 ATP5F1P24539 256 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-211ENST00000564815 RFX3P48380 749 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 PTH2RP49190 550 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
COMMD4-211ENST00000564815 ZNF763Q0D2J5 394 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 LCP2Q13094 533 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 IMPG1Q17R60 797 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 TCHHL1Q5QJ38 904 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-211ENST00000564815 BEND4Q6ZU67 534 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 MARCH3Q86UD3 253 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 WDR75Q8IWA0 830 aaKnown RBP12.78□□□□□ -0.36
COMMD4-211ENST00000564815 OR6K3Q8NGY3 331 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 CDC26Q8NHZ8 85 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 IFT81Q8WYA0 676 aa12.78□□□□□ -0.36
COMMD4-211ENST00000564815 GMPPAQ96IJ6 420 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-211ENST00000564815 A0A087WZY1 265 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 SERTM1A2A2V5 107 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 TRIM64BA6NI03 449 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 H3BQF6 201 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 PAX1P15863 534 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 IL11P20809 199 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 GABRA3P34903 492 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 EIF1AXP47813 144 aaKnown RBP12.77□□□□□ -0.37
COMMD4-211ENST00000564815 PRKAA2P54646 552 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 CLDN20P56880 219 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 NAA20P61599 178 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 VPS26BQ4G0F5 336 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 TMEM107Q6UX40 140 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 TIFABQ6ZNK6 161 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 EXOC3L1Q86VI1 746 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 TMEM151AQ8N4L1 468 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 OR5M1Q8NGP8 315 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 CEP70Q8NHQ1 597 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 DCAKDQ8WVC6 231 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 ELP4Q96EB1 424 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 CCDC126Q96EE4 140 aa12.77□□□□□ -0.37
COMMD4-211ENST00000564815 FMO2Q99518 471 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms