RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 ZNF700Q9H0M5 742 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 CXXC4Q9H2H0 198 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 CXorf36Q9H7Y0 433 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 KAT8Q9H7Z6 458 aaKnown RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 IL1RL2Q9HB29 575 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 NECTIN3Q9NQS3 549 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 DLL4Q9NR61 685 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 SIRT3Q9NTG7 399 aaPredicted RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 ZCCHC3Q9NUD5 404 aaKnown RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 CCM2LQ9NUG4 571 aaPredicted RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 DDX18Q9NVP1 670 aaKnown RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 SLC25A37Q9NYZ2 338 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 ADA2Q9NZK5 511 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 SLAMF8Q9P0V8 285 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 ZNF639Q9UID6 485 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 FAF1Q9UNN5 650 aaPredicted RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 PPIEQ9UNP9 301 aaKnown RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 RPH3AQ9Y2J0 694 aaPredicted RBP8.71□□□□□ -1.02
RPAP1-205ENST00000563293 CLDN16Q9Y5I7 305 aa8.71□□□□□ -1.02
RPAP1-205ENST00000563293 DNAJC13O75165 2243 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 OR6C76A6NM76 312 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 C17orf105B2RV13 164 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 UPK1AO00322 258 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CIB2O75838 187 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 AK1P00568 194 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 GSNP06396 782 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 GUSBP08236 651 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 ICAM2P13598 275 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 HOXB6P17509 224 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 MAOAP21397 527 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 MATN1P21941 496 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 SOAT1P35610 550 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CD96P40200 585 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CDKN2CP42773 168 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CDK9P50750 372 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 NR0B1P51843 470 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 SLC7A2P52569 658 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 OR4D2P58180 307 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 DCAF7P61962 342 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 MGAT2Q10469 447 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 TRAP1Q12931 704 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 FOXD4Q12950 439 aaPredicted RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 TUBA3CQ13748 450 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CAPRIN1Q14444 709 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 RGNQ15493 299 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 ZNHIT3Q15649 155 aaPredicted RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 PIGGQ5H8A4 983 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 PGM2L1Q6PCE3 622 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 TUBA3EQ6PEY2 450 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 TMEM107Q6UX40 140 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CPEB2Q7Z5Q1 589 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 NET1Q7Z628 596 aaPredicted RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 MSRB3Q8IXL7 192 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CDRT4Q8N9R6 151 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 MDS2Q8NDY4 140 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CA5BP1Q8WTZ4 195 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 REXO5Q96IC2 774 aaKnown RBP8.7□□□□□ -1.02
RPAP1-205ENST00000563293 FBXL20Q96IG2 436 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 SLC35G5Q96KT7 338 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 FRMD6Q96NE9 622 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 STACQ99469 402 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 LPAR4Q99677 370 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 MDFIQ99750 246 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 ACTRT3Q9BYD9 372 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 RBCK1Q9BYM8 510 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 TMEM38AQ9H6F2 299 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 MAT2BQ9NZL9 334 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 COPS7AQ9UBW8 275 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 CD300AQ9UGN4 299 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 ERVK-11Q9UQG0 969 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 LIPT1Q9Y234 373 aa8.7□□□□□ -1.02
RPAP1-205ENST00000563293 ZNF407Q9C0G0 2248 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 FBN1P35555 2871 aaKnown RBP8.69□□□□□ -1.02
RPAP1-205ENST00000563293 SAGE2PA6NJ88 616 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 FAM220BPB1ANY3 271 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 SEC24DO94855 1032 aaPredicted RBP8.69□□□□□ -1.02
RPAP1-205ENST00000563293 TOXO94900 526 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 PSMG1O95456 288 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 NQO1P15559 274 aaKnown RBP8.69□□□□□ -1.02
RPAP1-205ENST00000563293 MC3RP41968 323 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 CRATP43155 626 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 KHKP50053 298 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 ID2Q02363 134 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 LIPEQ05469 1076 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 DUSP2Q05923 314 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 GAB1Q13480 694 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 VEZF1Q14119 521 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 TRIM25Q14258 630 aaKnown RBP8.69□□□□□ -1.02
RPAP1-205ENST00000563293 ZNF267Q14586 743 aaPredicted RBP8.69□□□□□ -1.02
RPAP1-205ENST00000563293 EXT1Q16394 746 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 FXNQ16595 210 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 ZNF750Q32MQ0 723 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 KRTCAP3Q53RY4 240 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 GCNT6Q5T4J0 391 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 ATAD3BQ5T9A4 648 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 INTS11Q5TA45 600 aaKnown RBP8.69□□□□□ -1.02
RPAP1-205ENST00000563293 ZNF468Q5VIY5 522 aaPredicted RBP8.69□□□□□ -1.02
RPAP1-205ENST00000563293 ABHD17BQ5VST6 288 aa8.69□□□□□ -1.02
RPAP1-205ENST00000563293 PRAMEF8Q5VWM4 474 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms