RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SH2D1BO14796 132 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 ARPC1BO15143 372 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CFLARO15519 480 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 ATP6V1G1O75348 118 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 AKAP3O75969 853 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 REC8O95072 547 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 IGHV3-9P01782 118 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 PVRP15151 417 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 KIF5BP33176 963 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 TNNT2P45379 298 aaPredicted RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 NSFP46459 744 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 KIAA1024LP59773 190 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 RPS4XP62701 263 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 HMGN5P82970 282 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 WASHC5Q12768 1159 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 OVGP1Q12889 678 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 ZNF79Q15937 498 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 SGCBQ16585 318 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 ZNF674Q2M3X9 581 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 TCHHL1Q5QJ38 904 aaPredicted RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 SEL1L2Q5TEA6 688 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 NKAIN2Q5VXU1 208 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 HIST2H2AA3Q6FI13 130 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 IYDQ6PHW0 289 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CWC27Q6UX04 472 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CCDC91Q7Z6B0 441 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 ERICH1Q86X53 443 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CCDC170Q8IYT3 715 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 SLCO4A1Q96BD0 722 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 TBC1D31Q96DN5 1066 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 PHYHIPLQ96FC7 376 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 C5orf30Q96GV9 206 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 PIWIL1Q96J94 861 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 C9orf85Q96MD7 179 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CCDC43Q96MW1 224 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CPXM1Q96SM3 734 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 MAPKAP1Q9BPZ7 522 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 TEX13BQ9BXU2 312 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CENPMQ9NSP4 180 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 AKAP7Q9P0M2 348 aaPredicted RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 PRODH2Q9UF12 536 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 IKZF3Q9UKT9 509 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 CLEC4EQ9ULY5 219 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 NRXN2Q9P2S2 1712 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 TRPM7Q96QT4 1865 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 PALLDQ8WX93 1383 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 USP47Q96K76 1375 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 IGHV3-35A0A0C4DH35 117 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 A0A1W2PRV1 198 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TRIM64A6NGJ6 449 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TRIM64BA6NI03 449 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 FAM220BPB1ANY3 271 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 E7ENQ6 273 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 CPLX1O14810 134 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 FMO6PO60774 539 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 RTN2O75298 545 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 PDE5AO76074 875 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 APRTP07741 180 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 HIST1H2AGP0C0S8 130 aaPredicted RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 LAMP1P11279 417 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF18P17022 549 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF19P17023 458 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 CASP3P42574 277 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ARHGDIBP52566 201 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 VCPP55072 806 aaKnown RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 KIAA0040Q15053 153 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TGIF1Q15583 401 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 QRICH1Q2TAL8 776 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 SLC39A12Q504Y0 691 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 CCDC184Q52MB2 194 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 MS4A13Q5J8X5 152 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 C1QTNF12Q5T7M4 302 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 EDC4Q6P2E9 1401 aaKnown RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 SLC22A16Q86VW1 577 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 SNX32Q86XE0 403 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 IQCA1Q86XH1 822 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ARL6IP6Q8N6S5 226 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 RNASE8Q8TDE3 154 aaKnown RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TFB1MQ8WVM0 346 aaKnown RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 HIST1H2ACQ93077 130 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 FAF2Q96CS3 445 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 GPR137Q96N19 417 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TESK2Q96S53 571 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 JPH2Q9BR39 696 aaPredicted RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TRPV6Q9H1D0 765 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TMEM245Q9H330 911 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 PDFQ9HBH1 243 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 NRN1Q9NPD7 142 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ESM1Q9NQ30 184 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 TMCC3Q9ULS5 477 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF831Q5JPB2 1677 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ROCK2O75116 1388 aaKnown RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 SIPA1L3O60292 1781 aaPredicted RBP2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 ARFGEF2Q9Y6D5 1785 aa2.21□□□□□ -2.06
HDGFL3-202ENST00000562702 C10orf71Q711Q0 1435 aa2.2□□□□□ -2.06
HDGFL3-202ENST00000562702 NSD3Q9BZ95 1437 aa2.2□□□□□ -2.06
HDGFL3-202ENST00000562702 NUP98P52948 1817 aa2.2□□□□□ -2.06
HDGFL3-202ENST00000562702 C5orf51A6NDU8 294 aa2.2□□□□□ -2.06
HDGFL3-202ENST00000562702 A8MX80 341 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms