RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 FADS1O60427 444 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 FCMRO60667 390 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ANP32DO95626 131 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 CHRM4P08173 479 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 CELA3AP09093 270 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 NAGAP17050 411 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 CPA2P48052 419 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 NRG3P56975 720 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 MTPNP58546 118 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 POU6F2P78424 691 aaPredicted RBP8.96□□□□□ -0.98
CLK3-208ENST00000562626 PLAURQ03405 335 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ZNHIT3Q15649 155 aaPredicted RBP8.96□□□□□ -0.98
CLK3-208ENST00000562626 SYPL1Q16563 259 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 CYP27C1Q4G0S4 372 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 RUNDC3AQ59EK9 446 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 DCST2Q5T1A1 773 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 SLC22A10Q63ZE4 541 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ZNF324BQ6AW86 544 aaPredicted RBP8.96□□□□□ -0.98
CLK3-208ENST00000562626 HEPHL1Q6MZM0 1159 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 RPUSD3Q6P087 351 aaKnown RBP8.96□□□□□ -0.98
CLK3-208ENST00000562626 NUP54Q7Z3B4 507 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 FITM2Q8N6M3 262 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 POGLUT1Q8NBL1 392 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 CHDHQ8NE62 594 aaPredicted RBP8.96□□□□□ -0.98
CLK3-208ENST00000562626 OR4C3Q8NH37 302 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ADAMTS15Q8TE58 950 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 TSPEARQ8WU66 669 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 XAGE5Q8WWM1 108 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 MAL2Q969L2 176 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ZG16BQ96DA0 208 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ARSGQ96EG1 525 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 SGCZQ96LD1 299 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 SDF2Q99470 211 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ANGPTL4Q9BY76 406 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 QRSL1Q9H0R6 528 aaKnown RBP8.96□□□□□ -0.98
CLK3-208ENST00000562626 TIMMDC1Q9NPL8 285 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 SACM1LQ9NTJ5 587 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ARL8BQ9NVJ2 186 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 GIN1Q9NXP7 522 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 PCDHGB6Q9Y5F9 930 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 TEP1Q99973 2627 aaKnown RBP8.96□□□□□ -0.98
CLK3-208ENST00000562626 MYO7BQ6PIF6 2116 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 PRAMEF25A6NGN4 478 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 FAM166BA8MTA8 275 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 B8ZZF3 427 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 J3QKU1 62 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 SCO2O43819 266 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 CCDC22O60826 627 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ABCB7O75027 752 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 BCAS1O75363 584 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 TRIM3O75382 744 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 TNFRSF21O75509 655 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 GLSO94925 669 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 KCNH1O95259 989 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 UTS2O95399 124 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 OXSR1O95747 527 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 CNR1P21554 472 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 IL12BP29460 328 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ADSLP30566 484 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 EVI2BP34910 448 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 KHKP50053 298 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 GZMMP51124 257 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 TDGF1P3P51864 188 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 LRRC74AQ0VAA2 488 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 NFYCQ13952 458 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 RGNQ15493 299 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 MAPK14Q16539 360 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 DECR1Q16698 335 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.95□□□□□ -0.98
CLK3-208ENST00000562626 NDUFAF6Q330K2 333 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ARHGAP11BQ3KRB8 267 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 RPS26P11Q5JNZ5 115 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 OR5M10Q6IEU7 315 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 TYW3Q6IPR3 259 aaKnown RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 FRRS1Q6ZNA5 592 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 MARCH3Q86UD3 253 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 SIAH3Q8IW03 269 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 WDSUB1Q8N9V3 476 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 GATSQ8NAP1 163 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ZFP62Q8NB50 900 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 TMEM178AQ8NBL3 297 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 OR52N2Q8NGI0 321 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 TMEM125Q96AQ2 219 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ZNF524Q96C55 264 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ROPN1LQ96C74 230 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ANKRD27Q96NW4 1050 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 CGREF1Q99674 301 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 BARD1Q99728 777 aaKnown RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 TTTY12Q9BZ98 90 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 ANAPC2Q9UJX6 822 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 KLF13Q9Y2Y9 288 aaPredicted RBP8.95□□□□□ -0.98
CLK3-208ENST00000562626 LIPGQ9Y5X9 500 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 GMEB1Q9Y692 573 aa8.95□□□□□ -0.98
CLK3-208ENST00000562626 NCOA6Q14686 2063 aaPredicted RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 TTC36A6NLP5 189 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TTLL8A6PVC2 850 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TP53I11O14683 189 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 GNB5O14775 395 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 SLC22A2O15244 555 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms