RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SIRT6Q8N6T7 355 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 LINC00615Q96LM1 132 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 TRMT61BQ9BVS5 477 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 OSGEPL1Q9H4B0 414 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 MOSPD1Q9UJG1 213 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 CBLCQ9ULV8 474 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 IGHA1P01876 353 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 INHAP05111 366 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 DRD2P14416 443 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 HK1P19367 917 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 TRHRP34981 398 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 STAT5AP42229 794 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 PITPNBP48739 271 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 SRP9P49458 86 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 PER3P56645 1201 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 ST8SIA6P61647 398 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 RNASE12Q5GAN4 147 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 TOR2AQ5JU69 321 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 SMARCD3Q6STE5 483 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 AMZ2Q86W34 360 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 GPR135Q8IZ08 494 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 GJD3Q8N144 294 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 DIO2Q92813 273 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 MACROD1Q9BQ69 325 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF649Q9BS31 505 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 RANBP3Q9H6Z4 567 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 WASH6PQ9NQA3 447 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 GPR34Q9UPC5 381 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 RASD1Q9Y272 281 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 LOC105371267A0A1B0GV96 52 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 PIP5K1CO60331 668 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC22A5O76082 557 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 TFPIP10646 304 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 AHRP35869 848 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 AP2S1P53680 142 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 RGS8P57771 180 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 TGM3Q08188 693 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 TEAD2Q15562 447 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 CDC73Q6P1J9 531 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 CXXC5Q7LFL8 322 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 LUZP2Q86TE4 346 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF655Q8N720 491 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 NARFLQ9H6Q4 476 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 HINT3Q9NQE9 182 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 KLHL28Q9NXS3 571 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 MAFFQ9ULX9 164 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 PGRMC2O15173 223 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 AHCYP23526 432 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 FPR3P25089 353 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 RNF144AP50876 292 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 FAM27D1Q5T7N8 215 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 ARL9Q6T311 187 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 LSRQ86X29 649 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 ACBD7Q8N6N7 88 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 OR11H7Q8NGC8 314 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF764Q96H86 408 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 SAMD8Q96LT4 415 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 UBL7Q96S82 380 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 ALG8Q9BVK2 526 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■■□□ 15.8
VPS9D1-202ENST00000561976 DPAGT1Q9H3H5 408 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 KLHL1Q9NR64 748 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 BABAM2Q9NXR7 383 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 IL20Q9NYY1 176 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC23A2Q9UGH3 650 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 ADAM29Q9UKF5 820 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 CLEC4AQ9UMR7 237 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 RABL2BQ9UNT1 228 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 U3KQ87 197 aa13.07□□□□□ -0.32
VPS9D1-202ENST00000561976 DENND4CQ5VZ89 1909 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 A0A0A6YYD5 115 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ZC3H12DA2A288 527 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 SPINT1O43278 529 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 CXCL10P02778 98 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ANXA3P12429 323 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 RBMS1P29558 406 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 GCGRP47871 477 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 OR10A3P58181 314 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 SRP54P61011 504 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC9A5Q14940 896 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF793Q6ZN11 406 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 KREMEN2Q8NCW0 462 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF680Q8NEM1 530 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ZFPM2Q8WW38 1151 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 NR4A3Q92570 626 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 GPR137Q96N19 417 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 OR7D2Q96RA2 312 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 MED17Q9NVC6 651 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 GLTPQ9NZD2 209 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms