RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ADARP55265 1226 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 NCALDP61601 193 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 AP1S1P61966 158 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PPP1CAP62136 330 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 ELF3P78545 371 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 CRADDP78560 199 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 GNA12Q03113 381 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 ACVR1Q04771 509 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 ZBTB17Q13105 803 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 ITGA9Q13797 1035 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 GALNT3Q14435 633 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 POU6F1Q14863 301 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 EFTUD2Q15029 972 aaKnown RBP eCLIP2.96□□□□□ -1.94
SPG11-225ENST00000561391 DAZAP2Q15038 168 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 MAPRE2Q15555 327 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 TAF1AQ15573 450 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 INAQ16352 499 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 KCTD19Q17RG1 926 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 ZNF470Q6ECI4 717 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 FAM45BPQ6NSW5 357 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 RETSATQ6NUM9 610 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 UGT3A1Q6NUS8 523 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 METTL2BQ6P1Q9 378 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 PNCKQ6P2M8 343 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 TTC23LQ6PF05 361 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 IYDQ6PHW0 289 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 KDELC1Q6UW63 502 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 FAM198BQ6UWH4 519 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CDHR3Q6ZTQ4 885 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MDGA2Q7Z553 956 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 SLC9B2Q86UD5 537 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 LRRTM4Q86VH4 590 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PAQR7Q86WK9 346 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MEX3DQ86XN8 651 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 KLBQ86Z14 1044 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CPOQ8IVL8 374 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 RPRMLQ8N4K4 120 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PCDH20Q8N6Y1 951 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 FAM47BQ8NA70 645 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PRSS3P2Q8NHM4 247 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 FAM110DQ8TAY7 271 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 FAM45AQ8TCE6 357 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 C2CD4CQ8TF44 421 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 FAM222BQ8WU58 562 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 STMN2Q93045 179 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PIGTQ969N2 578 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.96□□□□□ -1.94
SPG11-225ENST00000561391 MCUR1Q96AQ8 359 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PTERQ96BW5 349 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 RBMXL1Q96E39 390 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 CELF6Q96J87 481 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 ZNF514Q96K75 400 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 RMDN2Q96LZ7 410 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 SERPINI1Q99574 410 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MGME1Q9BQP7 344 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CCDC28BQ9BUN5 200 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 FICDQ9BVA6 458 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 GATA5Q9BWX5 397 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 KRTAP1-5Q9BYS1 174 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CTDSP1Q9GZU7 261 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 DRC3Q9H069 523 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CCDC68Q9H2F9 335 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 VCX3BQ9H321 246 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 DCLRE1BQ9H816 532 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MOV10Q9HCE1 1003 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 NT5MQ9NPB1 228 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 SMYD2Q9NRG4 433 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 IARS2Q9NSE4 1012 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 TREX1Q9NSU2 369 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MPP6Q9NZW5 540 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 IFT80Q9P2H3 777 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 UBA2Q9UBT2 640 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 TBC1D29Q9UFV1 150 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 HAO1Q9UJM8 370 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 UTS2RQ9UKP6 389 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 RUVBL2Q9Y230 463 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 CHKBQ9Y259 395 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PADI2Q9Y2J8 665 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MFHAS1Q9Y4C4 1052 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MPDZO75970 2070 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PRKDCP78527 4128 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 ARID1AO14497 2285 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 A0A1W2PPR1 153 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RGSL1A5PLK6 1076 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ANKRD66B4E2M5 251 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ANKRD65E5RJM6 399 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 G3V2L1 256 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 J3KR12 359 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 STX7O15400 261 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 INSIG1O15503 277 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 UGT1A9O60656 530 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SOCS5O75159 536 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SMIM24O75264 130 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 FKBP6O75344 327 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 VPS26AO75436 327 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 GPC4O75487 556 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 NDUFS3O75489 264 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms