RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 MSTNO14793 375 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 CASKO14936 926 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 SEC14L5O43304 696 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 GMFGO60234 142 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 GOSR1O95249 250 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 PSMG1O95456 288 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 CCKARP32238 428 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 KIR2DL2P43627 348 aaPredicted RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 GSTM5P46439 218 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 RFX3P48380 749 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 CLDN20P56880 219 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 SIRPAP78324 504 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 MRPS22P82650 360 aaKnown RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 SLC29A2Q14542 456 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 IMPG1Q17R60 797 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 CYP27C1Q4G0S4 372 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 ZYG11AQ6WRX3 759 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 CHMP1BQ7LBR1 199 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 MARCH3Q86UD3 253 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 CXorf67Q86X51 503 aaPredicted RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 OR2L13Q8N349 312 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 ACMSDQ8TDX5 336 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 SMPDL3BQ92485 455 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 ELP4Q96EB1 424 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 ZNF845Q96IR2 970 aaPredicted RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 EGLN2Q96KS0 407 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 AMDHD1Q96NU7 426 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 FAM111AQ96PZ2 611 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 PINK1Q9BXM7 581 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 TXLNGYQ9BZA5 131 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 SHCBP1LQ9BZQ2 653 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 C12orf65Q9H3J6 166 aaKnown RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 NEUROD4Q9HD90 331 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 MYNNQ9NPC7 610 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 MIEF1Q9NQG6 463 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 DDX18Q9NVP1 670 aaKnown RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 NDRG3Q9UGV2 375 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 PTGDR2Q9Y5Y4 395 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 GXYLT2A0PJZ3 443 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 OR2M5A3KFT3 312 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 CCDC151A5D8V7 595 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 DEFB108AA8MXU0 73 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 SHISA8B8ZZ34 492 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 H3BML4 177 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 UTS2O95399 124 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 IGKV1D-16P01601 117 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 GSTA1P08263 222 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 MYL2P10916 166 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 PEPDP12955 493 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 FOSL1P15407 271 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 NTSP30990 170 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 CD79BP40259 229 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 EEF1A1P68104 462 aaKnown RBP10.48□□□□□ -0.73
USP3-220ENST00000561381 PSPHP78330 225 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 DECR1Q16698 335 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 EEF1A1P5Q5VTE0 462 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 ANKRD26P1Q6NSI1 321 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 NOXRED1Q6NXP6 359 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 APOOLQ6UXV4 268 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 ZNF551Q7Z340 670 aaPredicted RBP10.48□□□□□ -0.73
USP3-220ENST00000561381 TRIM46Q7Z4K8 759 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 GSPT2Q8IYD1 628 aaKnown RBP10.48□□□□□ -0.73
USP3-220ENST00000561381 MEIOBQ8N635 442 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 FNDC9Q8TBE3 224 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 DUSP19Q8WTR2 217 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 C1GALT1C1Q96EU7 318 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 DTNBP1Q96EV8 351 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 PGM2Q96G03 612 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 REPIN1Q9BWE0 567 aaKnown RBP10.48□□□□□ -0.73
USP3-220ENST00000561381 Q9N2J8 555 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 EQTNQ9NQ60 294 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 FAM120CQ9NX05 1096 aaKnown RBP10.48□□□□□ -0.73
USP3-220ENST00000561381 TAS2R7Q9NYW3 318 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 PSMC3IPQ9P2W1 217 aaPredicted RBP10.48□□□□□ -0.73
USP3-220ENST00000561381 ABCG2Q9UNQ0 655 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 EIF3LQ9Y262 564 aaKnown RBP10.48□□□□□ -0.73
USP3-220ENST00000561381 CCL27Q9Y4X3 112 aa10.48□□□□□ -0.73
USP3-220ENST00000561381 ARID1AO14497 2285 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 VPS13CQ709C8 3753 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 CTIFO43310 598 aaKnown RBP10.47□□□□□ -0.73
USP3-220ENST00000561381 TNFRSF21O75509 655 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 AQP8O94778 261 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 IL33O95760 270 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 CGAP01215 116 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 PROCP04070 461 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 CRHP06850 196 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 GABRA3P34903 492 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 UGT2B10P36537 528 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 NKX6-1P78426 367 aaPredicted RBP10.47□□□□□ -0.73
USP3-220ENST00000561381 HSPB3Q12988 150 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 KIAA0040Q15053 153 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 PON3Q15166 354 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 GRAMD1BQ3KR37 738 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 CLEC6AQ6EIG7 209 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 OR2A2Q6IF42 318 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 FRMD7Q6ZUT3 714 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 C22orf34Q6ZV56 151 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 SH2D5Q6ZV89 423 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 ZNF550Q7Z398 422 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms