RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 GRHL3Q8TE85 626 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 SLC38A5Q8WUX1 472 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 XAGE5Q8WWM1 108 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 RCN3Q96D15 328 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 AURKBQ96GD4 344 aaPredicted RBP11.11□□□□□ -0.63
IRF9-211ENST00000560852 TMEM41AQ96HV5 264 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 NSL1Q96IY1 281 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 ADOQ96SZ5 270 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 FAM173AQ9BQD7 235 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 MTHFD2LQ9H903 347 aaPredicted RBP11.11□□□□□ -0.63
IRF9-211ENST00000560852 QPCTLQ9NXS2 382 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 CALML5Q9NZT1 146 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 ABCD2Q9UBJ2 740 aa11.11□□□□□ -0.63
IRF9-211ENST00000560852 MRPS18CQ9Y3D5 142 aaKnown RBP11.11□□□□□ -0.63
IRF9-211ENST00000560852 A0A0G2JPF8 293 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 HNRNPCL2B2RXH8 293 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 HNRNPCL3B7ZW38 293 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 KIAA0513O60268 411 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 FCMRO60667 390 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 HNRNPCL1O60812 293 aaKnown RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 DNAJA2O60884 412 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 ZIC2O95409 532 aaPredicted RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 P04436 131 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 HNRNPCL4P0DMR1 293 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 CCL3P10147 92 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 ARAFP10398 606 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 ETFAP13804 333 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 RPS4Y1P22090 263 aaKnown RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 CALB2P22676 271 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 DSTNP60981 165 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 RPS26P62854 115 aaKnown RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 VEZF1Q14119 521 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 LY6DQ14210 128 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 FXNQ16595 210 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 ZNF630Q2M218 657 aaPredicted RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.1□□□□□ -0.63
IRF9-211ENST00000560852 WDR53Q7Z5U6 358 aaPredicted RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 MISPQ8IVT2 679 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 SLC30A8Q8IWU4 369 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 SULF2Q8IWU5 870 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 SLC15A3Q8IY34 581 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 C10orf111Q8N326 155 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 TEX19Q8NA77 164 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 OR4C3Q8NH37 302 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 SLC35B4Q969S0 331 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 RMND5BQ96G75 393 aaPredicted RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 C5orf34Q96MH7 638 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 ZNF583Q96ND8 569 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 NODALQ96S42 347 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 YIPF4Q9BSR8 244 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.1□□□□□ -0.63
IRF9-211ENST00000560852 SLC38A1Q9H2H9 487 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 ZNF71Q9NQZ8 489 aaPredicted RBP11.1□□□□□ -0.63
IRF9-211ENST00000560852 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 ARL8BQ9NVJ2 186 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 FBXO34Q9NWN3 711 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 NDE1Q9NXR1 346 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 P2RX2Q9UBL9 471 aa11.1□□□□□ -0.63
IRF9-211ENST00000560852 AGAP5A6NIR3 686 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 CCT8L1PA6NM43 557 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 PEX1O43933 1283 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 HS6ST1O60243 411 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 ICOSLGO75144 302 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 UTS2O95399 124 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 ETS2P15036 469 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 ELAVL4P26378 380 aaKnown RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 IL12BP29460 328 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 CPOXP36551 454 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 CRATP43155 626 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 PCBP3P57721 371 aaKnown RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 NNATQ16517 81 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 NADK2Q4G0N4 442 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 SOWAHCQ53LP3 525 aaPredicted RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 FNDC7Q5VTL7 733 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 TNFAIP8L2Q6P589 184 aaPredicted RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 APOOLQ6UXV4 268 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 DNAJC14Q6Y2X3 702 aaPredicted RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 FRRS1Q6ZNA5 592 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 SZRD1Q7Z422 152 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 GALNTL5Q7Z4T8 443 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 ZAR1Q86SH2 424 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 PTOV1Q86YD1 416 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 CMIPQ8IY22 773 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 PRR22Q8IZ63 422 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 POU5F2Q8N7G0 328 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 OR2M7Q8NG81 312 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 JADE3Q92613 823 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 RAB8BQ92930 207 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 THUMPD3Q9BV44 507 aaKnown RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 UBQLN3Q9H347 655 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 SDHAF3Q9NRP4 125 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 ANKRD10Q9NXR5 420 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 TMEM181Q9P2C4 612 aa11.09□□□□□ -0.63
IRF9-211ENST00000560852 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.09□□□□□ -0.63
IRF9-211ENST00000560852 NBEAQ8NFP9 2946 aa11.08□□□□□ -0.63
IRF9-211ENST00000560852 PRAMEF25A6NGN4 478 aa11.08□□□□□ -0.64
IRF9-211ENST00000560852 ETV2O00321 342 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms