RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PTGIRP43119 386 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 BAXQ07812 192 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 PLEKHS1Q5SXH7 462 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR4M1Q8NGD0 313 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF587Q96SQ5 575 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 DEFB126Q9BYW3 111 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 CCM2LQ9NUG4 571 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 SIX3O95343 332 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR4Q2P0C623 313 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 GPR4P46093 362 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 OGDHQ02218 1023 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ARHGAP1Q07960 439 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR13C4Q8NGS5 318 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 CD79AP11912 226 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 ANXA7P20073 488 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SRYQ05066 204 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 VAMP3Q15836 100 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SPANXN4Q5MJ08 99 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 LCN10Q6JVE6 187 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 CYB5D2Q8WUJ1 264 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 NKX3-1Q99801 234 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 HOXD1Q9GZZ0 328 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 UBIAD1Q9Y5Z9 338 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLIT1O75093 1534 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 GLOD5A6NK44 160 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SURF4O15260 269 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 MMP20O60882 483 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 POP7O75817 140 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 LCATP04180 440 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 CRABP1P29762 137 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC18A1P54219 525 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 RPS18P62269 152 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 NPAS4Q8IUM7 802 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 STEAP2Q8NFT2 490 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 ADAMTS18Q8TE60 1221 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PRRC1Q96M27 445 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 KREMEN1Q96MU8 473 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 CMSS1Q9BQ75 279 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC23A2Q9UGH3 650 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 YTHDF2Q9Y5A9 579 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 LOC105369274A0A096LPK9 316 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 A6NIZ1 184 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 GPR37L1O60883 481 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PPT1P50897 306 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 RAP1BP61224 184 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 RAP1AP62834 184 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 HNF4GQ14541 408 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM185AQ8N0U4 392 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR4N4Q8N0Y3 316 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 TEX26Q8N6G2 289 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR13J1Q8NGT2 312 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF417Q8TAU3 575 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF596Q8TC21 504 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 FCRL3Q96P31 734 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC35D1Q9NTN3 355 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 GAPDHSO14556 408 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 HLA-DQB2P05538 268 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SCGB1C2P0DMR2 95 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 TAGLN2P37802 199 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PSMB3P49720 205 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 STK19P49842 368 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 AKR1C1Q04828 323 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR4C5Q8NGB2 326 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR52H1Q8NGJ2 320 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR6F1Q8NGZ6 308 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 AIG1Q9NVV5 245 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PLSCR5A0PG75 271 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 CRYM-AS1A6NIL9 109 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR4D2P58180 307 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 ACTBL2Q562R1 376 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 IL34Q6ZMJ4 242 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PRSS48Q7RTY5 328 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 NWD1Q149M9 1564 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PMM2O15305 246 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 LDB2O43679 373 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PTHP01270 115 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 HTR1EP28566 365 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 ID2Q02363 134 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 CNIH2Q6PI25 160 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 DNAJC19Q96DA6 116 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 ARPC5LQ9BPX5 153 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 PLEK2Q9NYT0 353 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 EXO1Q9UQ84 846 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 MPIG6BO95866 241 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 CES4AQ5XG92 561 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms