RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CTSSP25774 331 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 DPP4P27487 766 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 PSMD4P55036 377 aaKnown RBP15.41■□□□□ 0.06
LRRC28-210ENST00000558879 MYBPHQ13203 477 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 MLC1Q15049 377 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 TESK1Q15569 626 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 CES4AQ5XG92 561 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 OR4K17Q8NGC6 315 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 AGR3Q8TD06 166 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 PPP3R2Q96LZ3 170 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 C3orf30Q96M34 536 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 MS4A4EQ96PG1 132 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 EQTNQ9NQ60 294 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 SIRT3Q9NTG7 399 aaPredicted RBP15.41■□□□□ 0.06
LRRC28-210ENST00000558879 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.41■□□□□ 0.06
LRRC28-210ENST00000558879 ATP6V1HQ9UI12 483 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 MRTO4Q9UKD2 239 aaKnown RBP15.41■□□□□ 0.06
LRRC28-210ENST00000558879 V9GYY5 206 aaPredicted RBP15.41■□□□□ 0.06
LRRC28-210ENST00000558879 ABCA4P78363 2273 aa15.41■□□□□ 0.06
LRRC28-210ENST00000558879 IGLV3-32A0A0A0MS00 114 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 FAM221AA4D161 298 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 CLCA1A8K7I4 914 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 SCAMP2O15127 329 aaKnown RBP15.4■□□□□ 0.06
LRRC28-210ENST00000558879 TMIGD3P0DMS9 266 aaPredicted RBP15.4■□□□□ 0.06
LRRC28-210ENST00000558879 ACP2P11117 423 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 GPC1P35052 558 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 STARP49675 285 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 ZNF844Q08AG5 666 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 FLYWCH1Q4VC44 716 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 MFSD12Q6NUT3 480 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 LRIG3Q6UXM1 1119 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 R3HCC1LQ7Z5L2 792 aaKnown RBP15.4■□□□□ 0.06
LRRC28-210ENST00000558879 CDRT4Q8N9R6 151 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 NUP43Q8NFH3 380 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 PIK3R3Q92569 461 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 WNT2BQ93097 391 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 DSN1Q9H410 356 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 C3orf14Q9HBI5 128 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 SH3BP4Q9P0V3 963 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 ZDHHC2Q9UIJ5 367 aa15.4■□□□□ 0.06
LRRC28-210ENST00000558879 TMEM114B3SHH9 223 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 SKAP2O75563 359 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-210ENST00000558879 RCBTB2O95199 551 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 KCNH1O95259 989 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 UTS2O95399 124 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 POU3F2P20265 443 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-210ENST00000558879 MAPK1P28482 360 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 UQCRC1P31930 480 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 GABRA3P34903 492 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 OPRM1P35372 400 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 MANFP55145 182 aaKnown RBP15.39■□□□□ 0.05
LRRC28-210ENST00000558879 PRR5P85299 388 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 FOXF2Q12947 444 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 BCL2A1Q16548 175 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 GRAMD1BQ3KR37 738 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 VPS26BQ4G0F5 336 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 PLXDC2Q6UX71 529 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 APOOLQ6UXV4 268 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 TMEM200AQ86VY9 491 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 ZZZ3Q8IYH5 903 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 CEP70Q8NHQ1 597 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 FAM110BQ8TC76 370 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 C1GALT1C1Q96EU7 318 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 LRRC46Q96FV0 321 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 RMND5BQ96G75 393 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-210ENST00000558879 TM9SF2Q99805 663 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 SFXN3Q9BWM7 321 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 SDHAF3Q9NRP4 125 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 CRIM1Q9NZV1 1036 aa15.39■□□□□ 0.05
LRRC28-210ENST00000558879 RPH3AQ9Y2J0 694 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-210ENST00000558879 EMC8O43402 210 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 CTAG2O75638 210 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 ZWINTO95229 277 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 NGFRP08138 427 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 HPCAL1P37235 193 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 RPL3P39023 403 aaKnown RBP15.38■□□□□ 0.05
LRRC28-210ENST00000558879 KIR2DL3P43628 341 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 CLDN15P56746 228 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 SORDQ00796 357 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 SRYQ05066 204 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 STX5Q13190 355 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 SNTB1Q13884 538 aaKnown RBP15.38■□□□□ 0.05
LRRC28-210ENST00000558879 PTGR1Q14914 329 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.38■□□□□ 0.05
LRRC28-210ENST00000558879 ATP6AP1LQ52LC2 224 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 C6orf136Q5SQH8 315 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 ZCCHC12Q6PEW1 402 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 MARCH3Q86UD3 253 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 SLC16A11Q8NCK7 471 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 PSMA8Q8TAA3 256 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 FAM120BQ96EK7 910 aaKnown RBP15.38■□□□□ 0.05
LRRC28-210ENST00000558879 C1orf50Q9BV19 199 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 SSU72Q9NP77 194 aaKnown RBP15.38■□□□□ 0.05
LRRC28-210ENST00000558879 MED11Q9P086 117 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 RAB21Q9UL25 225 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 HIVEP1P15822 2718 aa15.38■□□□□ 0.05
LRRC28-210ENST00000558879 EEF1E1-BLOC1S5C9J1V9 151 aa15.37■□□□□ 0.05
LRRC28-210ENST00000558879 ALG1L2C9J202 215 aa15.37■□□□□ 0.05
LRRC28-210ENST00000558879 EEF1E1O43324 174 aaKnown RBP15.37■□□□□ 0.05
LRRC28-210ENST00000558879 PEX11AO75192 247 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms