RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CDHR3Q6ZTQ4 885 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GPRIN3Q6ZVF9 776 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SLC26A9Q7LBE3 791 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TRPM8Q7Z2W7 1104 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF410Q86VK4 478 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 OR4N5Q8IXE1 308 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 KLHL7Q8IXQ5 586 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ALLCQ8N6M5 410 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 BANPQ8N9N5 519 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 OR4C15Q8NGM1 316 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 OR10J5Q8NHC4 309 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ACTL9Q8TC94 416 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 URGCPQ8TCY9 931 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 LRRC39Q96DD0 335 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 FBXO17Q96EF6 278 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 LINC00479Q96M42 142 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PANX3Q96QZ0 392 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 KCNK16Q96T55 309 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 HSD17B14Q9BPX1 270 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF559Q9BR84 538 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 NUP58Q9BVL2 599 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 CACNG6Q9BXT2 260 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 API5Q9BZZ5 524 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 RACGAP1Q9H0H5 632 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 EXO5Q9H790 373 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SYTL2Q9HCH5 934 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TUBG2Q9NRH3 451 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 FAM114A2Q9NRY5 505 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TREX1Q9NSU2 369 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 KLHL28Q9NXS3 571 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 COA4Q9NYJ1 87 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 MOSPD1Q9UJG1 213 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ANGPTL2Q9UKU9 493 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 RUVBL2Q9Y230 463 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PLLPQ9Y342 182 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF175Q9Y473 711 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 AUP1Q9Y679 476 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SMARCA4P51532 1647 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 KIF15Q9NS87 1388 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 IGHV3OR16-10A0A075B7F0 116 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GSAPA4D1B5 854 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 A8MVM7 634 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SLC1A7O00341 560 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 POLR1CO15160 346 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PGRMC2O15173 223 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SURF4O15260 269 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 NME2P1O60361 137 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 FLOT1O75955 427 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PLEKHA8P1O95397 391 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 LCA5LO95447 670 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 EZRP15311 586 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GOT1P17174 413 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TCN1P20061 433 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GLRA1P23415 457 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 AHCYP23526 432 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 NMT1P30419 496 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SOX3P41225 446 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SLC1A4P43007 532 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GPR4P46093 362 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ZFP36L2P47974 494 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 NPY2RP49146 381 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 NUMBP49757 651 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 RIDAP52758 137 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SMSP52788 366 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PAX9P55771 341 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 AP1S2P56377 157 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 CDKL1Q00532 357 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF33AQ06730 810 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 CYP24A1Q07973 514 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 DNAJC3Q13217 504 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SLAMF1Q13291 335 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 UGP2Q16851 508 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC58Q4VC31 144 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 BRMS1LQ5PSV4 323 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ZC2HC1BQ5TFG8 222 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SLC27A4Q6P1M0 643 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 Q6ZRP5 223 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 Q6ZTC4 211 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC121Q6ZUS5 278 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SH2D5Q6ZV89 423 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 KCTD9Q7L273 389 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ARMCX2Q7L311 632 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 FAM122BQ7Z309 247 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TRMT11Q7Z4G4 463 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 HOGA1Q86XE5 327 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 LACC1Q8IV20 430 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ELMOD2Q8IZ81 293 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 THEM5Q8N1Q8 247 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC63Q8NA47 563 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 MLKLQ8NB16 471 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 COLGALT1Q8NBJ5 622 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 STKLD1Q8NE28 680 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 RAET1EQ8TD07 263 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SCFD1Q8WVM8 642 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TMBIM1Q969X1 311 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 MOCOSQ96EN8 888 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 BSCL2Q96G97 398 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PDXPQ96GD0 296 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ANKRD36BP1Q96IX9 119 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SLC45A3Q96JT2 553 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms