RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CHMP24386 653 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PTX3P26022 381 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 LOXP28300 417 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SLC7A1P30825 629 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 GGT5P36269 586 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 UGT2B10P36537 528 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 STARP49675 285 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TMED10P49755 219 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 DIO3P55073 304 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 HNRNPH2P55795 449 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TAS2R39P59534 338 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TNFRSF17Q02223 184 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 IRF8Q02556 426 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CHIT1Q13231 466 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SLAMF1Q13291 335 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 BIKQ13323 160 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 RASA2Q15283 850 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TGFBIQ15582 683 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ZSCAN26Q16670 478 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TMEM35AQ53FP2 167 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 KHDRBS2Q5VWX1 349 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 OR4C11Q6IEV9 310 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 HMBOX1Q6NT76 420 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CCDC137Q6PK04 289 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF474Q6S9Z5 364 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ANGPTL8Q6UXH0 198 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 C22orf34Q6ZV56 151 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF550Q7Z398 422 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 GPR180Q86V85 440 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ZC3HC1Q86WB0 502 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CREG2Q8IUH2 290 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 GRAMD2AQ8IUY3 354 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CCDC103Q8IW40 242 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PRR22Q8IZ63 422 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 RNF175Q8N4F7 328 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SPATA6LQ8N4H0 392 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 MAPK1IP1LQ8NDC0 245 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 C7orf57Q8NEG2 295 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TOR1AIP2Q8NFQ8 470 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 OR1J4Q8NGS1 313 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 IGFBPL1Q8WX77 278 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TANKQ92844 425 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ADIPOR1Q96A54 375 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CTHRC1Q96CG8 243 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 STARD4Q96DR4 205 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CFAP36Q96G28 342 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ZC3HAV1LQ96H79 300 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 FAM111AQ96PZ2 611 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SECISBP2Q96T21 854 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PELOQ9BRX2 385 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 NAT9Q9BTE0 207 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PAIP1Q9H074 479 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 OR51B5Q9H339 312 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 METTL7AQ9H8H3 244 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CNOT10Q9H9A5 744 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SMURF1Q9HCE7 757 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 GALNT9Q9HCQ5 603 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SAYSD1Q9NPB0 183 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 LZTFL1Q9NQ48 299 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SERHLQ9NQF3 203 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 SNX15Q9NRS6 342 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CHCHD3Q9NX63 227 aaKnown RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 MS4A12Q9NXJ0 267 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF226Q9NYT6 803 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 FETUBQ9UGM5 382 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PHF11Q9UIL8 331 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 RABL2BQ9UNT1 228 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 JRKLQ9Y4A0 524 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ACTL7BQ9Y614 415 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 DSCAMO60469 2012 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 MED12LQ86YW9 2145 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 A0A1W2PR48 441 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 PLOD2O00469 737 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 PLPP1O14494 284 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 SLC16A6O15403 523 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CCNT2O60583 730 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 EEDO75530 441 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 B3GALNT1O75752 331 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 SOX30O94993 753 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 GPR75O95800 540 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 AIFM1O95831 613 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ABCB1P08183 1280 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CT62P0C5K7 136 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 SLC35E2BP0CK96 405 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 SLC35E2P0CK97 266 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 NR2F6P10588 404 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ABCD3P28288 659 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 TLX1P31314 330 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 GCKP35557 465 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CD79BP40259 229 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 PTGDSP41222 190 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 BUD31P41223 144 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ELK3P41970 407 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 PCYT1AP49585 367 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 LHX2P50458 406 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 RAP1GDS1P52306 607 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 MANFP55145 182 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ATP5J2P56134 94 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CLDN18P56856 261 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms