RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CD180Q99467 661 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 MCHR1Q99705 422 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 DUSP21Q9H596 190 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 TRIM45Q9H8W5 580 aaPredicted RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ATXN7L1Q9ULK2 861 aaPredicted RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 IFT52Q9Y366 437 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 CLDN16Q9Y5I7 305 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 HEMK1Q9Y5R4 338 aaPredicted RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 CSNK1G3Q9Y6M4 447 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 CPED1A4D0V7 1026 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 AGAP5A6NIR3 686 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 TMX2-CTNND1H3BSU7 103 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 HYAL3O43820 417 aaPredicted RBP17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 PRKNO60260 465 aaPredicted RBP17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 CYP7B1O75881 506 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 FADS2O95864 444 aaKnown RBP17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 MT-ND2P03891 347 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 OSMP13725 252 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 CXCR4P61073 352 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 POU6F2P78424 691 aaPredicted RBP17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 CSTF1Q05048 431 aaKnown RBP17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 MAP4K2Q12851 820 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 MFSD4BQ5TF39 518 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 PMS2CLQ68D20 193 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 C11orf74Q86VG3 221 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 ZNF619Q8N2I2 560 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 OR1L3Q8NH93 324 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 PHOX2BQ99453 314 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 NECTIN3Q9NQS3 549 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 PCDHGA10Q9Y5H3 936 aa17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 ARID1BQ8NFD5 2236 aaPredicted RBP17.02■□□□□ 0.32
SDR39U1-220ENST00000556548 A0A087WUU8 490 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 ZAR1LA6NP61 321 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 AP3D1O14617 1153 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 PRG2P13727 222 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 JUNBP17275 347 aaPredicted RBP17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 EMDP50402 254 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 EXOSC6Q5RKV6 272 aaKnown RBP17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 PLEKHM3Q6ZWE6 761 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 IQCF1Q8N6M8 205 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNF614Q8N883 585 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 CLIP3Q96DZ5 547 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 IL4I1Q96RQ9 567 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 STACQ99469 402 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 FOLH1BQ9HBA9 442 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 SELENONQ9NZV5 590 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 WARS2Q9UGM6 360 aaKnown RBP17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 ERVK-19Q9WJR5 959 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 RP1P56715 2156 aa17.02■□□□□ 0.31
SDR39U1-220ENST00000556548 FITM1A5D6W6 292 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 BCAS1O75363 584 aaPredicted RBP17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 SLITRK5O94991 958 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 NR4A1P22736 598 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 MAP3K8P41279 467 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 EEF1A1P68104 462 aaKnown RBP17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 PSG6Q00889 435 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 MVKQ03426 396 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 PRICKLE2Q7Z3G6 844 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 NKAIN4Q8IVV8 208 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 DCUN1D5Q9BTE7 237 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 A8MUA0 341 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 LAMTOR5O43504 91 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 RGS10O43665 173 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 SEC14L2O76054 403 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 KCNK2O95069 426 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 THY1P04216 161 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 CDC42P60953 191 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 MRPL2Q5T653 305 aaKnown RBP17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 C1orf189Q5VU69 101 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 GTF2IRD2BQ6EKJ0 949 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 ZCCHC12Q6PEW1 402 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 PTCHD4Q6ZW05 846 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 TMPRSS9Q7Z410 1059 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 GTF2IRD2Q86UP8 949 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 DEPDC4Q8N2C3 294 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 OR2I1PQ8NGU4 316 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 FAR1Q8WVX9 515 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 DIO2Q92813 273 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 SLC38A4Q969I6 547 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 TUBA1CQ9BQE3 449 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 INIPQ9NRY2 104 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 FAIMQ9NVQ4 179 aa17.01■□□□□ 0.31
SDR39U1-220ENST00000556548 H3BMH7 237 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 MAGEB3O15480 346 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNF749O43361 778 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 TRMUO75648 421 aaKnown RBP17■□□□□ 0.31
SDR39U1-220ENST00000556548 ATE1O95260 518 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 CFIP05156 583 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 GABRB1P18505 474 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 GPR3P46089 330 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 MASP1P48740 699 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNF730Q6ZMV8 503 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 PRSS58Q8IYP2 241 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 FNDC8Q8TC99 324 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 PTCHD1Q96NR3 888 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 GPR83Q9NYM4 423 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 CNIH4Q9P003 139 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 ENOPH1Q9UHY7 261 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 PILRBQ9UKJ0 227 aa17■□□□□ 0.31
SDR39U1-220ENST00000556548 SATB2Q9UPW6 733 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms