RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 KLHL7Q8IXQ5 586 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CCDC116Q8IYX3 515 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 OR4N2Q8NGD1 307 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 OR9A2Q8NGT5 310 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 OR10D3Q8NH80 312 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 DUSP19Q8WTR2 217 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 PYROXD1Q8WU10 500 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 NXNL1Q96CM4 212 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 C11orf24Q96F05 449 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CNRIP1Q96F85 164 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 VSTM2LQ96N03 204 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 FRG2BQ96QU4 278 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 HDHD5Q9BXW7 423 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 GLRX2Q9NS18 164 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CISD1Q9NZ45 108 aaKnown RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 WHRNQ9P202 907 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CPSF2Q9P2I0 782 aaKnown RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 UTS2RQ9UKP6 389 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CXCL13O43927 109 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 SEC31AO94979 1220 aaKnown RBP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 SIX3O95343 332 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 OPN1LWP04000 364 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 TUBBP07437 444 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 THBS1P07996 1170 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 MTHFD2P13995 350 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 IL11P20809 199 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 CRABP2P29373 138 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 AGTR1P30556 359 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 SSTR1P30872 391 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 THBS2P35442 1172 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 CCNG1P51959 295 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 CDH11P55287 796 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 C21orf58P58505 322 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 DR1Q01658 176 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 LOXL1Q08397 574 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 ZNF628Q5EBL2 1059 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 LIPNQ5VXI9 398 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 METTL4Q8N3J2 472 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 ZNF675Q8TD23 568 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 TRPC4APQ8TEL6 797 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 RNF138Q8WVD3 245 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 KCTD4Q8WVF5 259 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 ROBO4Q8WZ75 1007 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 KISS1RQ969F8 398 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 MTBPQ96DY7 904 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 TRIM2Q9C040 744 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 ELOVL6Q9H5J4 265 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 NOL11Q9H8H0 719 aaKnown RBP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 MANSC1Q9H8J5 431 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 FBXO34Q9NWN3 711 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 PAQR5Q9NXK6 330 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 FLRT3Q9NZU0 649 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 ABCG2Q9UNQ0 655 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 VDAC3Q9Y277 283 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 PPP2R2CQ9Y2T4 447 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 ACOT9Q9Y305 439 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 TNPO3Q9Y5L0 923 aaKnown RBP12.42□□□□□ -0.42
ACTN1-219ENST00000556432 CADP27708 2225 aa12.42□□□□□ -0.42
ACTN1-219ENST00000556432 A0A096LNT2 108 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 E7ESA3 106 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 NDUFB5O43674 189 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 LMX1BO60663 402 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 CD8AP01732 235 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 HNF1AP20823 631 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 ADH6P28332 368 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 STK11Q15831 433 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 FAM83EQ2M2I3 478 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 GLYR1Q49A26 553 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-219ENST00000556432 AGAP6Q5VW22 663 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 MARCH3Q86UD3 253 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 CCDC25Q86WR0 208 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
ACTN1-219ENST00000556432 BANPQ8N9N5 519 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 OR10H5Q8NGA6 315 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 HTRA1Q92743 480 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 EXOSC8Q96B26 276 aaKnown RBP12.41□□□□□ -0.42
ACTN1-219ENST00000556432 TM4SF18Q96CE8 201 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 ZNF681Q96N22 645 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 CACNG6Q9BXT2 260 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 TBL1XR1Q9BZK7 514 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 GIMAP4Q9NUV9 329 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 TAS2R9Q9NYW1 312 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 KCNS2Q9ULS6 477 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 B3GALT5Q9Y2C3 310 aa12.41□□□□□ -0.42
ACTN1-219ENST00000556432 TCRBV9S1A1TA0A576 114 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 TNFSF11O14788 317 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 FADS1O60427 444 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 RAMP1O60894 148 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 NTN1O95631 604 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 SLC25A16P16260 332 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 ME2P23368 584 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 IRF9Q00978 393 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 DECR1Q16698 335 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms