RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 HRH3Q9Y5N1 445 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 KLF2Q9Y5W3 355 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 CELSR2Q9HCU4 2923 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 C15orf38-AP3S2A0A0A6YYH1 394 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 GXYLT2A0PJZ3 443 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 TRPC5OSA6NMA1 111 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 CBR3O75828 277 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 C6orf47O95873 294 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 ACP2P11117 423 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 GABRA3P34903 492 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 PRIM2P49643 509 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 CLNS1AP54105 237 aaKnown RBP10.51□□□□□ -0.73
SLIRP-205ENST00000556310 GAS1P54826 345 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 CRYZQ08257 329 aaKnown RBP10.51□□□□□ -0.73
SLIRP-205ENST00000556310 TOMM20Q15388 145 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 DPY19L1Q2PZI1 675 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 TTMPQ5BVD1 217 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 HIST2H2BCQ6DN03 193 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 WDSUB1Q8N9V3 476 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 FAM83FQ8NEG4 500 aaPredicted RBP10.51□□□□□ -0.73
SLIRP-205ENST00000556310 OR8J2Q8NGG1 315 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 OR56A1Q8NGH5 318 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 FBXO30Q8TB52 745 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 GPR151Q8TDV0 419 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 NUDT8Q8WV74 236 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 PIK3R3Q92569 461 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 SLC9A6Q92581 669 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 TESCQ96BS2 214 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 MOAP1Q96BY2 351 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 DPY30Q9C005 99 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 OR2B2Q9GZK3 357 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 CXorf36Q9H7Y0 433 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 SNX8Q9Y5X2 465 aa10.51□□□□□ -0.73
SLIRP-205ENST00000556310 MED12Q93074 2177 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 HMGB1P1B2RPK0 211 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 PRSS44E7EML9 344 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 RNASET2O00584 256 aaKnown RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ANKRD28O15084 1053 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 SCO2O43819 266 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 FADS1O60427 444 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 CLDN14O95500 239 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 IGKV1D-16P01601 117 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 HMGN2P05204 90 aaKnown RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 KRT16P08779 473 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 HOXD4P09016 255 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ALOX5P09917 674 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ALDOCP09972 364 aaKnown RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 KITP10721 976 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 GABRA1P14867 456 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 EPHA3P29320 983 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 PTGER4P35408 488 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 GCKP35557 465 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 SOAT1P35610 550 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 KIR3DL1P43629 444 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 RFX3P48380 749 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 HBA1P69905 142 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 TP53BP2Q13625 1128 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 LASP1Q14847 261 aaKnown RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 DUSP5Q16690 384 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 PGS1Q32NB8 556 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 SPDYE7PQ495Y7 208 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 EIPR1Q53HC9 387 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 NHSL2Q5HYW2 709 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 C1orf185Q5T7R7 199 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 OR4F3Q6IEY1 312 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ZNF585AQ6P3V2 769 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 B3GNT6Q6ZMB0 384 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ACAD11Q709F0 780 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 SPATA19Q7Z5L4 167 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 WDR75Q8IWA0 830 aaKnown RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 RPRMLQ8N4K4 120 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 GOLGA6L1Q8N7Z2 621 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 COX18Q8N8Q8 333 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 SLC16A11Q8NCK7 471 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 PIWIL2Q8TC59 973 aaKnown RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 JADE3Q92613 823 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ZNF75CPQ92670 426 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-205ENST00000556310 STACQ99469 402 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 DUSP22Q9NRW4 184 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 AIG1Q9NVV5 245 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 GIN1Q9NXP7 522 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 COQ3Q9NZJ6 369 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 FLRT3Q9NZU0 649 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 PPP4R1LQ9P1A2 415 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 FAM215AQ9Y5M1 114 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ITPR2Q14571 2701 aa10.5□□□□□ -0.73
SLIRP-205ENST00000556310 ADGRG4Q8IZF6 3080 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 E9PBE3 544 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 CFLARO15519 480 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 KCNK2O95069 426 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 UTS2O95399 124 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 ACTL6AO96019 429 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 NGFRP08138 427 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 COL8A1P27658 744 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 LCN1P31025 176 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 SRD5A2P31213 254 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 DCTP40126 519 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 CCT3P49368 545 aaKnown RBP10.49□□□□□ -0.73
SLIRP-205ENST00000556310 CLK3P49761 638 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms